RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PPP1R9BQ96SB3 815 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 MACROD1Q9BQ69 325 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 C17orf80Q9BSJ5 609 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 CHST8Q9H2A9 424 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 PPCSQ9HAB8 311 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 DAAM1Q9Y4D1 1078 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 WNT6Q9Y6F9 365 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 ADCY9O60503 1353 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 BRCA1P38398 1863 aaKnown RBP3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 CACNA1SQ13698 1873 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 KTN1Q86UP2 1357 aaKnown RBP3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 CCDC7Q96M83 1385 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 RAB3GAP2Q9H2M9 1393 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 CENPJQ9HC77 1338 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 MANSC4A6NHS7 340 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 RRP9O43818 475 aaKnown RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 SRGAP2O75044 1071 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 PDE8BO95263 885 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 C1RP00736 705 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 IFIT2P09913 472 aaKnown RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 PTDSS1P48651 473 aaKnown RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 ITGA8P53708 1063 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 CYP4F2P78329 520 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 HTRA4P83105 476 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 MORC3Q14149 939 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 CCDC142Q17RM4 750 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 GRAMD1BQ3KR37 738 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 INO80DQ53TQ3 878 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 AARS2Q5JTZ9 985 aaKnown RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 CACHD1Q5VU97 1274 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 ERAP2Q6P179 960 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 CLEC4GQ6UXB4 293 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 Q6ZWC4 215 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 UNC13DQ70J99 1090 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 PARS2Q7L3T8 475 aaKnown RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 WDR53Q7Z5U6 358 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 CAND1Q86VP6 1230 aaKnown RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 SPARTQ8N0X7 666 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 KCNH5Q8NCM2 988 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 PJA1Q8NG27 643 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 MSLNLQ96KJ4 702 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 SARGQ9BW04 601 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 FSD1LQ9BXM9 530 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZSCAN32Q9NX65 697 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 MID2Q9UJV3 735 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 PADI4Q9UM07 663 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 GABRQQ9UN88 632 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 FRMD4BQ9Y2L6 1034 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 NSD2O96028 1365 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 KIF13BQ9NQT8 1826 aa3.97□□□□□ -1.77
HMGB1P6-201ENST00000569046 KCPQ6ZWJ8 1503 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 ARFGEF1Q9Y6D6 1849 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 LOC102723971A0A1B0GUV8 181 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 CGB1A6NKQ9 187 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 TARM1B6A8C7 271 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 AGPSO00116 658 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 RAB27BO00194 218 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 QSOX1O00391 747 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 CCP110O43303 1012 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 TOMM70O94826 608 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 TJP3O95049 919 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 RASAL1O95294 804 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 TXNP10599 105 aaKnown RBP3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 SLC5A1P13866 664 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 HGFP14210 728 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 CD38P28907 300 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 SERPINB3P29508 390 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 PIK3CBP42338 1070 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 PRELPP51888 382 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 FOXD4Q12950 439 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 CCNIQ14094 377 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 INSCQ1MX18 579 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 TMEM119Q4V9L6 283 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 PCID2Q5JVF3 399 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 FAM83BQ5T0W9 1011 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 CERCAMQ5T4B2 595 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 FCRLBQ6BAA4 426 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 CEP85Q6P2H3 762 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 NAPRTQ6XQN6 538 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 C16orf71Q8IYS4 520 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 KRT78Q8N1N4 520 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 RP9Q8TA86 221 aaKnown RBP3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 PPM1EQ8WY54 764 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 TBC1D5Q92609 795 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 PHKBQ93100 1093 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 ZBTB45Q96K62 511 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 PRR25Q96S07 402 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 TRIM5Q9C035 493 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 BTBD1Q9H0C5 482 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 TRMT13Q9NUP7 481 aaKnown RBP3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 SH3BP4Q9P0V3 963 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 ITGB1BP2Q9UKP3 347 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 HDAC9Q9UKV0 1011 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 ADAMTS5Q9UNA0 930 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 CORO2BQ9UQ03 480 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 FAM50BQ9Y247 325 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 PAXBP1Q9Y5B6 917 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 ANKRD36BQ8N2N9 1353 aa3.96□□□□□ -1.78
HMGB1P6-201ENST00000569046 MEGF6O75095 1541 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms