RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CLCNKBP51801 687 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 MLLT6P55198 1093 aaPredicted RBP6.16□□□□□ -1.42
CDH13-211ENST00000568770 ROR1Q01973 937 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 CTTNQ14247 550 aaKnown RBP6.16□□□□□ -1.42
CDH13-211ENST00000568770 ZC3H12BQ5HYM0 836 aaKnown RBP6.16□□□□□ -1.42
CDH13-211ENST00000568770 DGKKQ5KSL6 1271 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 CYP4A22Q5TCH4 519 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 IQCEQ6IPM2 695 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 MOXD1Q6UVY6 613 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 LRSAM1Q6UWE0 723 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 Q6ZUG5 572 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 PDZD4Q76G19 769 aaPredicted RBP6.16□□□□□ -1.42
CDH13-211ENST00000568770 CACNA2D4Q7Z3S7 1137 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 KBTBD6Q86V97 674 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 WDR5BQ86VZ2 330 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 MFSD6LQ8IWD5 586 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 TPH2Q8IWU9 490 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 LILRA2Q8N149 483 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 PLEKHO2Q8TD55 490 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 CSGALNACT1Q8TDX6 532 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 DEPDC1BQ8WUY9 529 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 GAB3Q8WWW8 586 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 DYDC2Q96IM9 177 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 LOXL4Q96JB6 756 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 IPO9Q96P70 1041 aaKnown RBP6.16□□□□□ -1.42
CDH13-211ENST00000568770 NFKBIZQ9BYH8 718 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 C22orf23Q9BZE7 217 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 CYP4F11Q9HBI6 524 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 NCOA5Q9HCD5 579 aaKnown RBP6.16□□□□□ -1.42
CDH13-211ENST00000568770 KCNMB3Q9NPA1 279 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 SH3GLB2Q9NR46 395 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 TIMM13Q9Y5L4 95 aaPredicted RBP6.16□□□□□ -1.42
CDH13-211ENST00000568770 HELZ2Q9BYK8 2649 aaKnown RBP6.16□□□□□ -1.42
CDH13-211ENST00000568770 MYH11P35749 1972 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 PCNX2A6NKB5 2137 aa6.16□□□□□ -1.42
CDH13-211ENST00000568770 TCHHQ07283 1943 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 HEPACAM2A8MVW5 462 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 SPECC1L-ADORA2AF8WAN1 911 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 TMEM189-UBE2V1I3L0A0 370 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 TBX3O15119 743 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 EXTL3O43909 919 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 KALRNO60229 2985 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 NPHS1O60500 1241 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 MOSPD3O75425 235 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 RPP40O75818 363 aaKnown RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 RECQL4O94761 1208 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 SLITRK3O94933 977 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 TOP3BO95985 862 aaKnown RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 FUCA1P04066 466 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 PRKCBP05771 671 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 HMGB1P09429 215 aaKnown RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 CCDC192P0DO97 292 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 MYL4P12829 197 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 ATF2P15336 505 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 IFNAR1P17181 557 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 FPR2P25090 351 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 HOXA6P31267 233 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 BRCC3P46736 316 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 PXNP49023 591 aaPredicted RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 NOVA1P51513 510 aaKnown RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 KPNA1P52294 538 aaPredicted RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 ARPP19P56211 112 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 CCT2P78371 535 aaKnown RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 CYP4F8P98187 520 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 KCNAB2Q13303 367 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 EPHA7Q15375 998 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 UPP1Q16831 310 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 GLRA4Q5JXX5 417 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 NCAPH2Q6IBW4 605 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 TCEAL6Q6IPX3 200 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 SDE2Q6IQ49 451 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 SLC8B1Q6J4K2 584 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 C1orf228Q6PIY5 440 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 CD300LGQ6UXG3 332 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 NOSTRINQ8IVI9 506 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 YAF2Q8IY57 180 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 TCEAL8Q8IYN2 117 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 BLIDQ8IZY5 108 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 TTC8Q8TAM2 541 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 ZSCAN18Q8TBC5 510 aaPredicted RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 HAS1Q92839 578 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 PTPRN2Q92932 1015 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 TCEAL3Q969E4 200 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 RSPRY1Q96DX4 576 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 LIN37Q96GY3 246 aaPredicted RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 ZNF512Q96ME7 567 aaPredicted RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 FAM20AQ96MK3 541 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 POLR3FQ9H1D9 316 aaPredicted RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 PDZD7Q9H5P4 517 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 TRPV4Q9HBA0 871 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 GPR27Q9NS67 375 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 WASF3Q9UPY6 502 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 GDAQ9Y2T3 454 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 INSL5Q9Y5Q6 135 aa6.15□□□□□ -1.42
CDH13-211ENST00000568770 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.15□□□□□ -1.42
CDH13-211ENST00000568770 FLNBO75369 2602 aaKnown RBP6.15□□□□□ -1.43
CDH13-211ENST00000568770 TENM4Q6N022 2769 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms