RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 MRPS35P82673 323 aaKnown RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 TAP1Q03518 808 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 DRICH1Q6PGQ1 229 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 CATSPERGQ6ZRH7 1159 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 SDCCAG8Q86SQ7 713 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 HPS6Q86YV9 775 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 DEFB107AQ8IZN7 70 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 CNPY3Q9BT09 278 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 ZNF408Q9H9D4 720 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 KRT82Q9NSB4 513 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 HOXC10Q9NYD6 342 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 LTBP1Q14766 1721 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 MAFO75444 373 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 WFS1O76024 890 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 RARBP10826 455 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 ANPEPP15144 967 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 ATP6V1B1P15313 513 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 NELFEP18615 380 aaKnown RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 GPD2P43304 727 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 ZNF143P52747 638 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 EFNA5P52803 228 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 RTP1P59025 263 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 SLC10A2Q12908 348 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 HIC1Q14526 733 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 KCNJ11Q14654 390 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 DCLK2Q8N568 766 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PQLC3Q8N755 202 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 REPS2Q8NFH8 660 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 TUBGCP5Q96RT8 1024 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 EBF3Q9H4W6 596 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PIM2Q9P1W9 311 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PGAP2Q9UHJ9 254 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 APOBEC2Q9Y235 224 aaKnown RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 HBS1LQ9Y450 684 aaKnown RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 STYXL1Q9Y6J8 313 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 SLC15A5A6NIM6 579 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 RFPL1O75677 317 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 INSRRP14616 1297 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 DCAF6Q58WW2 860 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 DALRD3Q5D0E6 543 aaKnown RBP9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 ZNF618Q5T7W0 954 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 IER5Q5VY09 327 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 ZPBP2Q6X784 338 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 WDR75Q8IWA0 830 aaKnown RBP9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 ZNF669Q96BR6 464 aaPredicted RBP9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 SCYL1Q96KG9 808 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 ZNF184Q99676 751 aaPredicted RBP9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 SAR1AQ9NR31 198 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 SNTG2Q9NY99 539 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 TAGLN3Q9UI15 199 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 LRCH1Q9Y2L9 728 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 LRRC42Q9Y546 428 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 ADM5C9JUS6 153 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 CLDN5O00501 218 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 CILPO75339 1184 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 HSPA4LO95757 839 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 AMHP03971 560 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 PSMB4P28070 264 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 PEX2P28328 305 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 SLC1A6P48664 564 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 PKNOX1P55347 436 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 HSF5Q4G112 596 aaPredicted RBP9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 CDCA2Q69YH5 1023 aaPredicted RBP9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 PID1Q7Z2X4 250 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 PHTF2Q8N3S3 785 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 GALNT4Q8N4A0 578 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 NT5C1AQ9BXI3 368 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 ZNF518BQ9C0D4 1074 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 WDR55Q9H6Y2 383 aaPredicted RBP9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 ARHGEF4Q9NR80 690 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 DPP3Q9NY33 737 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 KLHL8Q9P2G9 620 aaPredicted RBP9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 TUBGCP4Q9UGJ1 667 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 ANGPTL2Q9UKU9 493 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 SNX10Q9Y5X0 201 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 RPS6KL1Q9Y6S9 549 aa9.25□□□□□ -0.93
HDGFL3-206ENST00000568294 NFASCO94856 1347 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 C2CD4BA6NLJ0 364 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 ACKR2O00590 384 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 PLSCR1O15162 318 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 LMNAP02545 664 aaKnown RBP9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 ARF4P18085 180 aaPredicted RBP9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 STIP1P31948 543 aaKnown RBP9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 PAPOLAP51003 745 aaKnown RBP9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 AP2B1P63010 937 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 DPY19L2Q6NUT2 758 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 TTC30AQ86WT1 665 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 COLGALT1Q8NBJ5 622 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 CMASQ8NFW8 434 aaPredicted RBP9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 NMD3Q96D46 503 aaKnown RBP9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 GCNAQ96QF7 691 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 USP29Q9HBJ7 922 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 SLC4A7Q9Y6M7 1214 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 LY75O60449 1722 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 BRCA2P51587 3418 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 PPP1R12AO14974 1030 aaPredicted RBP9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 FAM189A1O60320 539 aa9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 ENO3P13929 434 aaPredicted RBP9.24□□□□□ -0.93
HDGFL3-206ENST00000568294 ARSAP15289 507 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms