RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 SPATA2LQ8IUW3 424 aaPredicted RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 FMNL3Q8IVF7 1028 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 MRPL43Q8N983 215 aaKnown RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 ATAD1Q8NBU5 361 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 AGBL5Q8NDL9 886 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 UBA3Q8TBC4 463 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 MYCBPAPQ8TBZ2 947 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 SLC2A14Q8TDB8 520 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 SLC20A1Q8WUM9 679 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 ZNF606Q8WXB4 792 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 SYN2Q92777 582 aaPredicted RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 MYLPFQ96A32 169 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 PCED1BQ96HM7 432 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 FAM161BQ96MY7 647 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 KLHL5Q96PQ7 755 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 DNAJC7Q99615 494 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 PKMYT1Q99640 499 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 B3GNT5Q9BYG0 378 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 RHOBTB2Q9BYZ6 727 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 PDCL3Q9H2J4 239 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 TTYH1Q9H313 450 aaPredicted RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 PRDM12Q9H4Q4 367 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 HAUS4Q9H6D7 363 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 RXFP1Q9HBX9 757 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 NGRNQ9NPE2 291 aaKnown RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMG1-214ENST00000568038 SEPT11Q9NVA2 429 aaKnown RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 FNIP2Q9P278 1114 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 KIAA1257Q9ULG3 409 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 WDR27A2RRH5 827 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 MTMR11A4FU01 709 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 M0QYV0 167 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 O00370 1275 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 PER2O15055 1255 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 MED7O43513 233 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 PAGE1O75459 146 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 SERPING1P05155 500 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 MMEP08473 750 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 SPATA31D3P0C874 917 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 CHRNB2P17787 502 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 TNFAIP3P21580 790 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 BDNFP23560 247 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 HNRNPH3P31942 346 aaKnown RBP8.17□□□□□ -1.1
SMG1-214ENST00000568038 NDUFV1P49821 464 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 GSDMDP57764 484 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 ADCY1Q08828 1119 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 CCDC173Q0VFZ6 552 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 GPR17Q13304 367 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 RAB33AQ14088 237 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 CNGA2Q16280 664 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 ZC3H12AQ5D1E8 599 aaKnown RBP8.17□□□□□ -1.1
SMG1-214ENST00000568038 PPM1JQ5JR12 505 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 ARHGAP17Q68EM7 881 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 DENND1BQ6P3S1 775 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 C4orf50Q6ZRC1 276 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 SPATA31D4Q6ZUB0 917 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 PAQR9Q6ZVX9 377 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 ZNF571Q7Z3V5 609 aaPredicted RBP8.17□□□□□ -1.1
SMG1-214ENST00000568038 ADGRD2Q7Z7M1 963 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 PASD1Q8IV76 773 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 GPR65Q8IYL9 337 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 FUKQ8N0W3 1084 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 TTC9BQ8N6N2 239 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 DDX1Q92499 740 aaKnown RBP8.17□□□□□ -1.1
SMG1-214ENST00000568038 MRPL38Q96DV4 380 aaKnown RBP8.17□□□□□ -1.1
SMG1-214ENST00000568038 PDLIM2Q96JY6 352 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 PANX2Q96RD6 677 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 CHP1Q99653 195 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 HNRNPABQ99729 332 aaKnown RBP8.17□□□□□ -1.1
SMG1-214ENST00000568038 AGPAT1Q99943 283 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMG1-214ENST00000568038 ZNF518BQ9C0D4 1074 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 LMAN2LQ9H0V9 348 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 HESX1Q9UBX0 185 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 NOCTQ9UK39 431 aaKnown RBP8.17□□□□□ -1.1
SMG1-214ENST00000568038 TSPAN16Q9UKR8 245 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMG1-214ENST00000568038 PCDHB5Q9Y5E4 795 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 IRAK3Q9Y616 596 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 MYO9BQ13459 2157 aa8.17□□□□□ -1.1
SMG1-214ENST00000568038 TMEM265A0A087WTH1 108 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 PRRG1O14668 218 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 TGM5O43548 720 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 ATP8B3O60423 1300 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 CLASP2O75122 1294 aaKnown RBP8.16□□□□□ -1.1
SMG1-214ENST00000568038 SOAT2O75908 522 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 ABLIM3O94929 683 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 SEC24AO95486 1093 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 VNN2O95498 520 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 CYP2F1P24903 491 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 ELF1P32519 619 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 EIF4A3P38919 411 aaKnown RBP8.16□□□□□ -1.1
SMG1-214ENST00000568038 PRKCIP41743 596 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 NRIP1P48552 1158 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 GPR15P49685 360 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 MAP3K7CLP57077 242 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 FMO1Q01740 532 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 CDR2Q01850 454 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 ZNF252P-AS1Q0IIN9 211 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 SMARCB1Q12824 385 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms