RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 ARHGEF4Q9NR80 690 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 ETNK2Q9NVF9 386 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 DNAJC17Q9NVM6 304 aaKnown RBP12.17□□□□□ -0.46
BBS4-213ENST00000567279 FBXW11Q9UKB1 542 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 SLC27A5Q9Y2P5 690 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 MFHAS1Q9Y4C4 1052 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 CDY1Q9Y6F8 540 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 PTPRSQ13332 1948 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 TBC1D4O60343 1298 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 HSPA1AP0DMV8 641 aaKnown RBP12.16□□□□□ -0.46
BBS4-213ENST00000567279 HSPA1BP0DMV9 641 aaKnown RBP12.16□□□□□ -0.46
BBS4-213ENST00000567279 GBE1Q04446 702 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 SCAPQ12770 1279 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 PSMD5Q16401 504 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 USP41Q3LFD5 358 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 MGAT5BQ3V5L5 792 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 SPDYCQ5MJ68 293 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 NCBP2-AS2Q69YL0 99 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 MFSD5Q6N075 450 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 HIBCHQ6NVY1 386 aaPredicted RBP12.16□□□□□ -0.46
BBS4-213ENST00000567279 KCNT2Q6UVM3 1135 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 LRIG3Q6UXM1 1119 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 BEND5Q7L4P6 421 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 SCD5Q86SK9 330 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 TMEM199Q8N511 208 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 TAB3Q8N5C8 712 aaPredicted RBP12.16□□□□□ -0.46
BBS4-213ENST00000567279 GPR152Q8TDT2 470 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 SH3GL2Q99962 352 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 VN1R3Q9BXE9 311 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 NMUR1Q9HB89 426 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 ANLNQ9NQW6 1124 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 VPS18Q9P253 973 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 TPX2Q9ULW0 747 aaKnown RBP12.16□□□□□ -0.46
BBS4-213ENST00000567279 SCML2Q9UQR0 700 aa12.16□□□□□ -0.46
BBS4-213ENST00000567279 FAM72CH0Y354 149 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 C2CD2LO14523 706 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 KCNN4O15554 427 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 MFSD11O43934 449 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 EFCAB14O75071 495 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 VNN2O95498 520 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 RPL17P18621 184 aaKnown RBP12.15□□□□□ -0.46
BBS4-213ENST00000567279 RPL22P35268 128 aaKnown RBP12.15□□□□□ -0.46
BBS4-213ENST00000567279 CXCR3P49682 368 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 PGFP49763 221 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 NRLP54845 237 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 USP46P62068 366 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 BTG3Q14201 252 aaPredicted RBP12.15□□□□□ -0.46
BBS4-213ENST00000567279 CEP85LQ5SZL2 805 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 FAM72AQ5TYM5 149 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 DENND2CQ68D51 928 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 FAM72DQ6L9T8 149 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 KIAA1841Q6NSI8 718 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 FAM72BQ86X60 149 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 CDKL3Q8IVW4 592 aaPredicted RBP12.15□□□□□ -0.46
BBS4-213ENST00000567279 CCDC33Q8N5R6 958 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 FBXO22Q8NEZ5 403 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 ZNF689Q96CS4 500 aaPredicted RBP12.15□□□□□ -0.46
BBS4-213ENST00000567279 PWWP2AQ96N64 755 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 ZNF558Q96NG5 402 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 OXCT2Q9BYC2 517 aaPredicted RBP12.15□□□□□ -0.46
BBS4-213ENST00000567279 TKTL2Q9H0I9 626 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 CRISPLD1Q9H336 500 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 FBXO44Q9H4M3 255 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 WDCPQ9H6R7 721 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 AAASQ9NRG9 546 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 GMIPQ9P107 970 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 MTRRQ9UBK8 725 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 GREB1Q4ZG55 1949 aa12.15□□□□□ -0.46
BBS4-213ENST00000567279 CFAP69A5D8W1 941 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 GOLGA8KD6RF30 607 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 I6L893 689 aaPredicted RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 NDC80O14777 642 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 ADAM12O43184 909 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 IRAK2O43187 625 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 MSI1O43347 362 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 IGLV3-25P01717 112 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 RARGP13631 454 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 RBL1P28749 1068 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 TPI1P60174 286 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 IFFO1Q0D2I5 559 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 SMARCB1Q12824 385 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 SLC10A2Q12908 348 aaPredicted RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 RNASEH2BQ5TBB1 312 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 DENND5BQ6ZUT9 1274 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 RFX8Q6ZV50 586 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 C2orf15Q8WU43 125 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 LRRN4Q8WUT4 740 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 CASP10Q92851 521 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 FBXO32Q969P5 355 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 TSPYL1Q9H0U9 437 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 ADAM7Q9H2U9 754 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 EPB41L4BQ9H329 900 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 PABPC3Q9H361 631 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 CDC42EP4Q9H3Q1 356 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 SEMA4AQ9H3S1 761 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 SMOC2Q9H3U7 446 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 RC3H2Q9HBD1 1191 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 SFMBT1Q9UHJ3 866 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 NUDT5Q9UKK9 219 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms