RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 KLK14Q9P0G3 267 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 SUCOQ9UBS9 1254 aaKnown RBP6.4□□□□□ -1.38
CDH13-209ENST00000567109 TMCC3Q9ULS5 477 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 ZNF711Q9Y462 761 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 TRIM17Q9Y577 477 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 IGKV6D-41A0A0C4DH26 115 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 SOWAHDA6NJG2 315 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 RGS5O15539 181 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 SEC31AO94979 1220 aaKnown RBP6.4□□□□□ -1.38
CDH13-209ENST00000567109 PDHA1P08559 390 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 FNTAP49354 379 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 CENPCQ03188 943 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 DDX39BQ13838 428 aaKnown RBP6.4□□□□□ -1.38
CDH13-209ENST00000567109 KYNUQ16719 465 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 GJC2Q5T442 439 aaPredicted RBP6.4□□□□□ -1.38
CDH13-209ENST00000567109 CACHD1Q5VU97 1274 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 TRAF7Q6Q0C0 670 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 SPATA21Q7Z572 469 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 DSG4Q86SJ6 1040 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 LINC00523Q86TU6 105 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 GATAD2AQ86YP4 633 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 STAG2Q8N3U4 1231 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 KRT35Q92764 455 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 TBCDQ9BTW9 1192 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 RAB6BQ9NRW1 208 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 PLAGL2Q9UPG8 496 aa6.4□□□□□ -1.38
CDH13-209ENST00000567109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.4□□□□□ -1.38
CDH13-209ENST00000567109 POTEMA6NI47 508 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 ZNF839A8K0R7 811 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 CLTBP09497 229 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 SP100P23497 879 aaPredicted RBP6.4□□□□□ -1.39
CDH13-209ENST00000567109 STIP1P31948 543 aaKnown RBP6.4□□□□□ -1.39
CDH13-209ENST00000567109 PTPN7P35236 360 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 GALNTL6Q49A17 601 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 TSPAN14Q8NG11 270 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 TFB1MQ8WVM0 346 aaKnown RBP6.4□□□□□ -1.39
CDH13-209ENST00000567109 ATXN2LQ8WWM7 1075 aaKnown RBP6.4□□□□□ -1.39
CDH13-209ENST00000567109 IPCEF1Q8WWN9 437 aaPredicted RBP6.4□□□□□ -1.39
CDH13-209ENST00000567109 VPS4BO75351 444 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 ENDOD1O94919 500 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 ITIH2P19823 946 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 NUMBP49757 651 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 COASYQ13057 564 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 STILQ15468 1287 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 GRIK5Q16478 980 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 PALB2Q86YC2 1186 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 COLGALT2Q8IYK4 626 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 SEC16BQ96JE7 1060 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 CHAMP1Q96JM3 812 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 MCEEQ96PE7 176 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 APBA2Q99767 749 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 ELAC2Q9BQ52 826 aaKnown RBP6.4□□□□□ -1.39
CDH13-209ENST00000567109 PRRG3Q9BZD7 231 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 CLPBQ9H078 707 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 FAM49BQ9NUQ9 324 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 RIC8BQ9NVN3 520 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 ALKBH4Q9NXW9 302 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 HPS5Q9UPZ3 1129 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 KLHL20Q9Y2M5 609 aa6.4□□□□□ -1.39
CDH13-209ENST00000567109 VPS26AO75436 327 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 HAUS5O94927 633 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 ENO3P13929 434 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 GNA13Q14344 377 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 DRAP1Q14919 205 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 RFFLQ8WZ73 363 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 TGS1Q96RS0 853 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 SENP7Q9BQF6 1050 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 V9GYQ6 96 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 MON2Q7Z3U7 1717 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 A0A087WZ62 844 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 MSCO60682 206 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SNHG28P0DPA3 235 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 NDUFV1P49821 464 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SLC26A2P50443 739 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 RBBP4Q09028 425 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 CACUL1Q86Y37 369 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 ARHGEF26Q96DR7 871 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 TAAR1Q96RJ0 339 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 NOD2Q9HC29 1040 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 EXOSC4Q9NPD3 245 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 MRPL39Q9NYK5 338 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 VPS51Q9UID3 782 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 FAM237AA0A1B0GTK4 181 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 NFIBO00712 420 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 HBP1O60381 514 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 UMPSP11172 480 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PNPLA4P41247 253 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PDX1P52945 283 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 RPL10AP62906 217 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 IZUMO3Q5VZ72 239 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 ZFP1Q6P2D0 407 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PEG10Q86TG7 708 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 CAMK1DQ8IU85 385 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SYTL5Q8TDW5 730 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 HASPINQ8TF76 798 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 FAR1Q8WVX9 515 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 CLCC1Q96S66 551 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 FAM167BQ9BTA0 163 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 TIMMDC1Q9NPL8 285 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms