RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RGS7P49802 495 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 SNX16P57768 344 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 DAOAP59103 153 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 EFEMP1Q12805 493 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 LY6G5CQ5SRR4 150 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 BSPRYQ5W0U4 402 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 FSTL4Q6MZW2 842 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 RHBDF2Q6PJF5 856 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 ZNF662Q6ZS27 426 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 ZNF677Q86XU0 584 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 MIB1Q86YT6 1006 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 BBS7Q8IWZ6 715 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 CCAR2Q8N163 923 aaKnown RBP14.03□□□□□ -0.16
CLK3-218ENST00000566926 CHFRQ96EP1 664 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 PRMT8Q9NR22 394 aaPredicted RBP14.03□□□□□ -0.16
CLK3-218ENST00000566926 SPHK2Q9NRA0 654 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 ST7Q9NRC1 585 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 RBM12Q9NTZ6 932 aaKnown RBP14.03□□□□□ -0.16
CLK3-218ENST00000566926 SPTLC3Q9NUV7 552 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 FAM86C1Q9NVL1 165 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 KIF2AO00139 706 aaPredicted RBP14.02□□□□□ -0.17
CLK3-218ENST00000566926 FOXN3O00409 490 aaPredicted RBP14.02□□□□□ -0.17
CLK3-218ENST00000566926 MDM4O15151 490 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 STC2O76061 302 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 PAPSS2O95340 614 aaPredicted RBP14.02□□□□□ -0.17
CLK3-218ENST00000566926 CHKAP35790 457 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 RPL34P49207 117 aaKnown RBP14.02□□□□□ -0.17
CLK3-218ENST00000566926 SLC18A3Q16572 532 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 E4F1Q66K89 784 aaPredicted RBP14.02□□□□□ -0.17
CLK3-218ENST00000566926 PPP1R2P3Q6NXS1 205 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 RAD9BQ6WBX8 426 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 MAML2Q8IZL2 1156 aaPredicted RBP14.02□□□□□ -0.17
CLK3-218ENST00000566926 ATRIPQ8WXE1 791 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 PLD4Q96BZ4 506 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 NOX5Q96PH1 765 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 XPO6Q96QU8 1125 aaKnown RBP14.02□□□□□ -0.17
CLK3-218ENST00000566926 PNKPQ96T60 521 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 CHP1Q99653 195 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 TSGA10Q9BZW7 698 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 HAUS4Q9H6D7 363 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 ZSCAN32Q9NX65 697 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 WDR35Q9P2L0 1181 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 PCDHGC3Q9UN70 934 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 PPP2R2CQ9Y2T4 447 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 HBS1LQ9Y450 684 aaKnown RBP14.02□□□□□ -0.17
CLK3-218ENST00000566926 CEP83Q9Y592 693 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 PCDHGA2Q9Y5H1 932 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 ADGRG1Q9Y653 693 aa14.02□□□□□ -0.17
CLK3-218ENST00000566926 SPAG17Q6Q759 2223 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 SLC12A8A0AV02 714 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 YJEFN3A6XGL0 299 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 CHURC1-FNTBB4DL54 471 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 E7ENQ6 273 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 SCAMP3O14828 347 aaKnown RBP14.01□□□□□ -0.17
CLK3-218ENST00000566926 HOXC11O43248 304 aaPredicted RBP14.01□□□□□ -0.17
CLK3-218ENST00000566926 EGFP01133 1207 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 CALCAP01258 141 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 LTFP02788 710 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 APODP05090 189 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 EIF4A3P38919 411 aaKnown RBP14.01□□□□□ -0.17
CLK3-218ENST00000566926 OPRD1P41143 372 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 ARID5AQ03989 594 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 ASTE1Q2TB18 679 aaPredicted RBP14.01□□□□□ -0.17
CLK3-218ENST00000566926 ANO4Q32M45 955 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 DENND1BQ6P3S1 775 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 Q6ZNB5 142 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 BHLHA9Q7RTU4 235 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 NKD2Q969F2 451 aaPredicted RBP14.01□□□□□ -0.17
CLK3-218ENST00000566926 ACDQ96AP0 544 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 SLC4A5Q9BY07 1137 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 LHX5Q9H2C1 402 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 PDCL3Q9H2J4 239 aa14.01□□□□□ -0.17
CLK3-218ENST00000566926 FBRSL1Q9HCM7 1045 aaKnown RBP14.01□□□□□ -0.17
CLK3-218ENST00000566926 AJAP1Q9UKB5 411 aaPredicted RBP14.01□□□□□ -0.17
CLK3-218ENST00000566926 FAM186AA6NE01 2351 aa14□□□□□ -0.17
CLK3-218ENST00000566926 GREM1O60565 184 aa14□□□□□ -0.17
CLK3-218ENST00000566926 RNF40O75150 1001 aa14□□□□□ -0.17
CLK3-218ENST00000566926 CORO1AP31146 461 aaKnown RBP14□□□□□ -0.17
CLK3-218ENST00000566926 HOXD11P31277 338 aaPredicted RBP14□□□□□ -0.17
CLK3-218ENST00000566926 GRIA2P42262 883 aa14□□□□□ -0.17
CLK3-218ENST00000566926 HARS2P49590 506 aaKnown RBP14□□□□□ -0.17
CLK3-218ENST00000566926 GAS6Q14393 721 aa14□□□□□ -0.17
CLK3-218ENST00000566926 GAB4Q2WGN9 574 aa14□□□□□ -0.17
CLK3-218ENST00000566926 MSANTD2Q6P1R3 559 aa14□□□□□ -0.17
CLK3-218ENST00000566926 Q6ZS52 159 aa14□□□□□ -0.17
CLK3-218ENST00000566926 TOGARAM2Q6ZUX3 1019 aa14□□□□□ -0.17
CLK3-218ENST00000566926 BEND5Q7L4P6 421 aa14□□□□□ -0.17
CLK3-218ENST00000566926 TMEM110Q86TL2 294 aa14□□□□□ -0.17
CLK3-218ENST00000566926 ALYREFQ86V81 257 aaKnown RBP14□□□□□ -0.17
CLK3-218ENST00000566926 TMEM25Q86YD3 366 aa14□□□□□ -0.17
CLK3-218ENST00000566926 NDRG1Q92597 394 aaKnown RBP14□□□□□ -0.17
CLK3-218ENST00000566926 EDEM1Q92611 657 aa14□□□□□ -0.17
CLK3-218ENST00000566926 WBP2Q969T9 261 aa14□□□□□ -0.17
CLK3-218ENST00000566926 BBS2Q9BXC9 721 aa14□□□□□ -0.17
CLK3-218ENST00000566926 MIS12Q9H081 205 aa14□□□□□ -0.17
CLK3-218ENST00000566926 MARK1Q9P0L2 795 aa14□□□□□ -0.17
CLK3-218ENST00000566926 DEC1Q9P2X7 70 aa14□□□□□ -0.17
CLK3-218ENST00000566926 RIF1Q5UIP0 2472 aaKnown RBP14□□□□□ -0.17
CLK3-218ENST00000566926 RALGAPA1Q6GYQ0 2036 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 A0A0A0MRY4 1105 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms