RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ITGA9Q13797 1035 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 SLC45A4Q5BKX6 768 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 RAB44Q7Z6P3 723 aaPredicted RBP11.94□□□□□ -0.5
CDH1-210ENST00000566612 POU5F2Q8N7G0 328 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 PLD5Q8N7P1 536 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 PIP4K2CQ8TBX8 421 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 PRDM12Q9H4Q4 367 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 SARS2Q9NP81 518 aaKnown RBP11.94□□□□□ -0.5
CDH1-210ENST00000566612 HNRNPCL1O60812 293 aaKnown RBP11.94□□□□□ -0.5
CDH1-210ENST00000566612 ENO3P13929 434 aaPredicted RBP11.94□□□□□ -0.5
CDH1-210ENST00000566612 PSMB4P28070 264 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 PTPN4P29074 926 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 ANKRD20A2Q5SQ80 823 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 TMEM63BQ5T3F8 832 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 ANKRD20A1Q5TYW2 823 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 LCLAT1Q6UWP7 414 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 GPR142Q7Z601 462 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 TEX9Q8N6V9 391 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 FAM136AQ96C01 138 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 SENP8Q96LD8 212 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 FBXO6Q9NRD1 293 aaPredicted RBP11.94□□□□□ -0.5
CDH1-210ENST00000566612 KAT6AQ92794 2004 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 TADA2AO75478 443 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 PIGRP01833 764 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 PSEN2P49810 448 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 NCALDP61601 193 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 POU6F1Q14863 301 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 KIF19Q2TAC6 998 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 IQSEC1Q6DN90 963 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 SERPINI1Q99574 410 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 SYT11Q9BT88 431 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 LRRC40Q9H9A6 602 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 IL1RAPL1Q9NZN1 696 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 STARD13Q9Y3M8 1113 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 TCRBV7S3A2A0A539 114 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 C2orf71A6NGG8 1288 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 A8MUI8 341 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 NVLO15381 856 aaKnown RBP11.93□□□□□ -0.5
CDH1-210ENST00000566612 UNC5CO95185 931 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 PTPN1P18031 435 aaKnown RBP11.93□□□□□ -0.5
CDH1-210ENST00000566612 TCN1P20061 433 aaPredicted RBP11.93□□□□□ -0.5
CDH1-210ENST00000566612 FOXN2P32314 431 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 NSUN2Q08J23 767 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDH1-210ENST00000566612 ILDR2Q71H61 639 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 ECHDC2Q86YB7 292 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 NT5DC4Q86YG4 428 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 ANKRD52Q8NB46 1076 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 PPHLN1Q8NEY8 458 aaKnown RBP11.93□□□□□ -0.5
CDH1-210ENST00000566612 DNAJC9Q8WXX5 260 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 LPPQ93052 612 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 LRGUKQ96M69 825 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 ZFP42Q96MM3 310 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 DPEP3Q9H4B8 488 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 CHADO15335 359 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 TSPAN1O60635 241 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 GLRA3O75311 464 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 TMEM63AO94886 807 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 RABGGTBP53611 331 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 MGAT5Q09328 741 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 NOMO1Q15155 1222 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 CXCL17Q6UXB2 119 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 OR52K1Q8NGK4 314 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 FAM96AQ9H5X1 160 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 EPS15L1Q9UBC2 864 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 VANGL2Q9ULK5 521 aa11.93□□□□□ -0.5
CDH1-210ENST00000566612 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 EDF1O60869 148 aaKnown RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 C22orf31O95567 290 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 RALBP11234 206 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 BDNFP23560 247 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 PAPOLAP51003 745 aaKnown RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 WDR4P57081 412 aaKnown RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 CAPRIN2Q6IMN6 1127 aaKnown RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 NAPEPLDQ6IQ20 393 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 ZDHHC17Q8IUH5 632 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 SUGP1Q8IWZ8 645 aaKnown RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 PYROXD2Q8N2H3 581 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 B3GALNT2Q8NCR0 500 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 SCG3Q8WXD2 468 aaKnown RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 RMDN1Q96DB5 314 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 TRIM56Q9BRZ2 755 aaKnown RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 TBC1D10AQ9BXI6 508 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 NUF2Q9BZD4 464 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 CHST12Q9NRB3 414 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 ZNF112Q9UJU3 913 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 E9PBE3 544 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 GRIN3BO60391 1043 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 KLHL41O60662 606 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 YBX3P16989 372 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDH1-210ENST00000566612 GRM5P41594 1212 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 GPD2P43304 727 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 BST1Q10588 318 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 DPY19L2P1Q6NXN4 242 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 SPATA24Q86W54 205 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 PPTC7Q8NI37 304 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 CLEC4CQ8WTT0 213 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 SEC14L1Q92503 715 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 CPA3P15088 417 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 NR2C2P49116 596 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms