RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 KLHL40Q2TBA0 621 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 ANO6Q4KMQ2 910 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 MPPE1Q53F39 396 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 PASD1Q8IV76 773 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 AOPEPQ8N6M6 819 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 TSTD1Q8NFU3 115 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 RUBCNQ92622 972 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 HHIPQ96QV1 700 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 SYNCQ9H7C4 482 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 ASNSD1Q9NWL6 643 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 CYTH4Q9UIA0 394 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 STOML2Q9UJZ1 356 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 STARD13Q9Y3M8 1113 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 ZFHX2Q9C0A1 2572 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-211ENST00000565922 LGALS16A8MUM7 142 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 ALDH1A2O94788 518 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 IGLV3-27P01718 113 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 PNMA6AP0CW24 399 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-211ENST00000565922 CYP11B1P15538 503 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 ZNF18P17022 549 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 TIE1P35590 1138 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 KIR2DL1P43626 348 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-211ENST00000565922 SLC11A2P49281 568 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 DMWDQ09019 674 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 SIM2Q14190 667 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-211ENST00000565922 EFHC1Q5JVL4 640 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 ADGRF1Q5T601 910 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 FYB2Q5VWT5 728 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 TOGARAM2Q6ZUX3 1019 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 ZNF513Q8N8E2 541 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-211ENST00000565922 TMEM35BQ8NCS4 154 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 C1orf131Q8NDD1 294 aaKnown RBP20.69■□□□□ 0.9
CMTM3-211ENST00000565922 DQX1Q8TE96 717 aaKnown RBP20.69■□□□□ 0.9
CMTM3-211ENST00000565922 DDI1Q8WTU0 396 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 BHMTQ93088 406 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 AZIN2Q96A70 460 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 PCMTD1Q96MG8 357 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-211ENST00000565922 CPXM1Q96SM3 734 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 DDX50Q9BQ39 737 aaKnown RBP20.69■□□□□ 0.9
CMTM3-211ENST00000565922 SLC2A11Q9BYW1 496 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 GANQ9H2C0 597 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 PLK2Q9NYY3 685 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 NCDNQ9UBB6 729 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 EBF1Q9UH73 591 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 GMEB2Q9UKD1 530 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 TLR6Q9Y2C9 796 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 SLC27A6Q9Y2P4 619 aa20.69■□□□□ 0.9
CMTM3-211ENST00000565922 LRRC10BA6NIK2 292 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 AXIN1O15169 862 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 KLF8O95600 359 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-211ENST00000565922 UBXN1Q04323 297 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 MESP2Q0VG99 397 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 NCAPHQ15003 741 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 CRY1Q16526 586 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 PRR23BQ6ZRT6 265 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 ZNF677Q86XU0 584 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 ZDHHC17Q8IUH5 632 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 CCDC33Q8N5R6 958 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 ALLCQ8N6M5 410 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 IL17RCQ8NAC3 791 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 TXNDC5Q8NBS9 432 aaKnown RBP20.68■□□□□ 0.9
CMTM3-211ENST00000565922 MSANTD4Q8NCY6 345 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 NEK11Q8NG66 645 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 SPAG5Q96R06 1193 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 POLMQ9NP87 494 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-211ENST00000565922 FAM207AQ9NSI2 230 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-211ENST00000565922 FBXO10Q9UK96 956 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 NAALADL1Q9UQQ1 740 aa20.68■□□□□ 0.9
CMTM3-211ENST00000565922 RIF1Q5UIP0 2472 aaKnown RBP20.67■□□□□ 0.9
CMTM3-211ENST00000565922 TYW5A2RUC4 315 aaKnown RBP20.67■□□□□ 0.9
CMTM3-211ENST00000565922 IRAK2O43187 625 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 HSF2BPO75031 334 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 FYNP06241 537 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 CDH5P33151 784 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-211ENST00000565922 POLR2FP61218 127 aaKnown RBP20.67■□□□□ 0.9
CMTM3-211ENST00000565922 SYCP1Q15431 976 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 LAIR1Q6GTX8 287 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 SDE2Q6IQ49 451 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 CEP68Q76N32 757 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 WDTC1Q8N5D0 677 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 ZNF557Q8N988 423 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-211ENST00000565922 GAB3Q8WWW8 586 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 DMDP11532 3685 aa20.67■□□□□ 0.9
CMTM3-211ENST00000565922 PLXND1Q9Y4D7 1925 aa20.66■□□□□ 0.9
CMTM3-211ENST00000565922 RPP40O75818 363 aaKnown RBP20.66■□□□□ 0.9
CMTM3-211ENST00000565922 LSM8O95777 96 aaKnown RBP20.66■□□□□ 0.9
CMTM3-211ENST00000565922 APOEP02649 317 aa20.66■□□□□ 0.9
CMTM3-211ENST00000565922 ZNF165P49910 485 aa20.66■□□□□ 0.9
CMTM3-211ENST00000565922 SFTPA1Q8IWL2 248 aa20.66■□□□□ 0.9
CMTM3-211ENST00000565922 UCMAQ8WVF2 138 aa20.66■□□□□ 0.9
CMTM3-211ENST00000565922 TMA16Q96EY4 203 aaKnown RBP20.66■□□□□ 0.9
CMTM3-211ENST00000565922 ERGIC2Q96RQ1 377 aa20.66■□□□□ 0.9
CMTM3-211ENST00000565922 SIK3Q9Y2K2 1263 aa20.66■□□□□ 0.9
CMTM3-211ENST00000565922 OTOGLQ3ZCN5 2332 aa20.65■□□□□ 0.9
CMTM3-211ENST00000565922 SGK1O00141 431 aa20.65■□□□□ 0.9
CMTM3-211ENST00000565922 NPC1O15118 1278 aa20.65■□□□□ 0.9
CMTM3-211ENST00000565922 TRIM24O15164 1050 aa20.65■□□□□ 0.9
CMTM3-211ENST00000565922 HRO43593 1189 aa20.65■□□□□ 0.9
CMTM3-211ENST00000565922 ACSL4O60488 711 aa20.65■□□□□ 0.9
CMTM3-211ENST00000565922 CISD3P0C7P0 127 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms