RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 HECTD3Q5T447 861 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 CHRDL2Q6WN34 429 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 VSIG1Q86XK7 387 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 FAM71BQ8TC56 605 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 TKTL2Q9H0I9 626 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 ZNF334Q9HCZ1 680 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-213ENST00000565834 DPP7Q9UHL4 492 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 RASAL2Q9UJF2 1139 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 TLR6Q9Y2C9 796 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 EFR3BQ9Y2G0 817 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 CCL16O15467 120 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 TJP3O95049 919 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 TUBP50607 506 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 KLF1Q13351 362 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-213ENST00000565834 PPP2R5DQ14738 602 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 PABPC1LQ4VXU2 614 aaKnown RBP19.46■□□□□ 0.71
COMMD4-213ENST00000565834 TEX35Q5T0J7 233 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 ADGRD2Q7Z7M1 963 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 RBM23Q86U06 439 aaKnown RBP19.46■□□□□ 0.71
COMMD4-213ENST00000565834 MIB1Q86YT6 1006 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 NOA1Q8NC60 698 aaKnown RBP19.46■□□□□ 0.71
COMMD4-213ENST00000565834 HDAC7Q8WUI4 952 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 KCTD15Q96SI1 283 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-213ENST00000565834 ZNF670Q9BS34 389 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 NACA2Q9H009 215 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 TLE6Q9H808 572 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 TMPRSS4Q9NRS4 437 aa19.46■□□□□ 0.71
COMMD4-213ENST00000565834 ATP5C1P36542 298 aaKnown RBP19.45■□□□□ 0.7
COMMD4-213ENST00000565834 TBX4P57082 545 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 TUBB4BP68371 445 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 MMRN1Q13201 1228 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 TRIP4Q15650 581 aaPredicted RBP19.45■□□□□ 0.7
COMMD4-213ENST00000565834 ELMSAN1Q6PJG2 1045 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 RFX6Q8HWS3 928 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 PYROXD2Q8N2H3 581 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 MAK16Q9BXY0 300 aaKnown RBP19.45■□□□□ 0.7
COMMD4-213ENST00000565834 ANLNQ9NQW6 1124 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 MTMR10Q9NXD2 777 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 ARHGEF38Q9NXL2 777 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 DNMT3LQ9UJW3 386 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 NR2E1Q9Y466 385 aa19.45■□□□□ 0.7
COMMD4-213ENST00000565834 ZNF487B1APH4 448 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 F11P03951 625 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 SLC2A3P11169 496 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 HOXA9P31269 272 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 SIX1Q15475 284 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-213ENST00000565834 KLHDC10Q6PID8 442 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 TMEM150AQ86TG1 271 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 ZDHHC14Q8IZN3 488 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 MMGT1Q8N4V1 131 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 UBXN4Q92575 508 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 MAGEB5Q9BZ81 275 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 PRO3102Q9H379 93 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 IL21Q9HBE4 155 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 ASAH2Q9NR71 780 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.44■□□□□ 0.7
COMMD4-213ENST00000565834 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.44■□□□□ 0.7
COMMD4-213ENST00000565834 HCFC2Q9Y5Z7 792 aa19.44■□□□□ 0.7
COMMD4-213ENST00000565834 V9GYY5 206 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-213ENST00000565834 DOCK6Q96HP0 2047 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 SLC12A8A0AV02 714 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 I6L893 689 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 RFPL2O75678 378 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 HNRNPA1P09651 372 aaKnown RBP eCLIP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 GABRR2P28476 465 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 ARL4AP40617 200 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 KPNA1P52294 538 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 ADCY2Q08462 1091 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 TFDP2Q14188 446 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 BBS12Q6ZW61 710 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 TMC8Q8IU68 726 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 KLHL7Q8IXQ5 586 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 HS6ST3Q8IZP7 471 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 PRELID2Q8N945 189 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 TSC1Q92574 1164 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 SLC39A13Q96H72 371 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 FCRL2Q96LA5 508 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 RNF157Q96PX1 679 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 CORO1BQ9BR76 489 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 LRRC3Q9BY71 257 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 RCOR3Q9P2K3 495 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 SPDYE4A6NLX3 237 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 H3BRJ5 948 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 CTIFO43310 598 aaKnown RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 COCHO43405 550 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 CST8O60676 142 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 OAS1P00973 400 aaKnown RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 APOEP02649 317 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 IL4RP24394 825 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 GTF2F1P35269 517 aaKnown RBP eCLIP19.43■□□□□ 0.74e-9■■■■■ 28.7
COMMD4-213ENST00000565834 NRIP1P48552 1158 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 TERF1P54274 439 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 DYNLT1P63172 113 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 DUSP6Q16828 381 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 ANKRD20A8PQ5CZ79 823 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 FAF2Q96CS3 445 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 MRPL38Q96DV4 380 aaKnown RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 GCNAQ96QF7 691 aa19.43■□□□□ 0.7
COMMD4-213ENST00000565834 KRT12Q99456 494 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms