RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 STARD3Q14849 445 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 CNGA2Q16280 664 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 GOLGA7BQ2TAP0 167 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 MPPE1Q53F39 396 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 TRIM61Q5EBN2 209 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 SMYD5Q6GMV2 418 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 TOGARAM2Q6ZUX3 1019 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 DENND1CQ8IV53 801 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 SIX6OS1Q8N1H7 587 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 UBR7Q8N806 425 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 RNF139Q8WU17 664 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 IRGQQ8WZA9 623 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 ULBP1Q9BZM6 244 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 CALCOCO1Q9P1Z2 691 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 STOML2Q9UJZ1 356 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 SLC6A14Q9UN76 642 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 PLXND1Q9Y4D7 1925 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 EPG5Q9HCE0 2579 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 UPK3BL1B0FP48 263 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 UPK3BL2E5RIL1 263 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 O00370 1275 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 SERPINF2P08697 491 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 OXTRP30559 389 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 PTGER3P43115 390 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 MFAP3P55082 362 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 CCDC40Q4G0X9 1142 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 PKDCCQ504Y2 493 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 SYCP2LQ5T4T6 812 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 BSPRYQ5W0U4 402 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 ANKS1BQ7Z6G8 1248 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 FMNL3Q8IVF7 1028 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 ZNF557Q8N988 423 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 DDI1Q8WTU0 396 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 SLC35F5Q8WV83 523 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 FOXJ1Q92949 421 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 AZIN2Q96A70 460 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 ZNF419Q96HQ0 510 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 PIWIL1Q96J94 861 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 HSFY1Q96LI6 401 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 ACOX2Q99424 681 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 ZDHHC4Q9NPG8 344 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 ELOVL2Q9NXB9 296 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 PLK2Q9NYY3 685 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 MAN1B1Q9UKM7 699 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 NFE2L3Q9Y4A8 694 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 STON1Q9Y6Q2 735 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 PI4KAP42356 2102 aa12.74□□□□□ -0.37
GTF3C1-204ENST00000564664 IGHV1OR15-9A0A0B4J2B8 117 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 TRIM49BA6NDI0 452 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 SYNCRIPO60506 623 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 NDUFS2O75306 463 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 FBXO21O94952 628 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 HMBSP08397 361 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 NDUFV2P19404 249 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 WASP42768 502 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 GCNT1Q02742 428 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 ZNF33AQ06730 810 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 MPP7Q5T2T1 576 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 ADGRF1Q5T601 910 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 KIAA1211LQ6NV74 962 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 TTI2Q6NXR4 508 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 TMEM270Q6UE05 265 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 BHLHA9Q7RTU4 235 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 UNC45BQ8IWX7 931 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 FRMD1Q8N878 549 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 UBA3Q8TBC4 463 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 BHMTQ93088 406 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 MRGPRX1Q96LB2 322 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 ITM2CQ9NQX7 267 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 TMEM74BQ9NUR3 256 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 CACNA2D2Q9NY47 1150 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 SUSD2Q9UGT4 822 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 LAMA1P25391 3075 aa12.73□□□□□ -0.37
GTF3C1-204ENST00000564664 CACNA1BQ00975 2339 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 YJEFN3A6XGL0 299 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 PATE3B3GLJ2 98 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 PPP1R3GB7ZBB8 358 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 E7ENQ6 273 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 TULP2O00295 520 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 SYPP08247 313 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 C7P10643 843 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 GNSP15586 552 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 ENGP17813 658 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 KCNA4P22459 653 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 ITPKAP23677 461 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 NOVA1P51513 510 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 ATXN3P54252 364 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 MARSP56192 900 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 GFPT1Q06210 699 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 RING1Q06587 406 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 ADIGQ0VDE8 80 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 LRMPQ12912 555 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 MORC3Q14149 939 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 WDR45BQ5MNZ6 344 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 NUGGCQ68CJ6 796 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 PSAPL1Q6NUJ1 521 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms