RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PTPN9P43378 593 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 NRIP1P48552 1158 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 GLUD2P49448 558 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CDH6P55285 790 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 OTUD4Q01804 1114 aaKnown RBP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ELAVL2Q12926 359 aaKnown RBP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TFDP2Q14188 446 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TAZQ16635 292 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 UPP1Q16831 310 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CDO1Q16878 200 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 P3H1Q32P28 736 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 USP41Q3LFD5 358 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 FAM171A1Q5VUB5 890 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PDE12Q6L8Q7 609 aaKnown RBP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PMF1Q6P1K2 205 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 DSTYKQ6XUX3 929 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SLC26A9Q7LBE3 791 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 LIMS2Q7Z4I7 341 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TMEM110Q86TL2 294 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 VSIG1Q86XK7 387 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ARFGAP1Q8N6T3 406 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 C3orf58Q8NDZ4 430 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CMASQ8NFW8 434 aaPredicted RBP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SLC35B2Q8TB61 432 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ACTL9Q8TC94 416 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SLC35F5Q8WV83 523 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TEKT4Q8WW24 435 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 HSFY1Q96LI6 401 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PEBP4Q96S96 227 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PHOX2BQ99453 314 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TMEM109Q9BVC6 243 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CALN1Q9BXU9 219 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 MAK16Q9BXY0 300 aaKnown RBP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 EPB41L4BQ9H329 900 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CDC42EP4Q9H3Q1 356 aaKnown RBP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TLE6Q9H808 572 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 NGRNQ9NPE2 291 aaKnown RBP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 MRPL17Q9NRX2 175 aaKnown RBP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 BCCIPQ9P287 314 aaKnown RBP eCLIP7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 DNPEPQ9ULA0 475 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SHOC2Q9UQ13 582 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 NME7Q9Y5B8 376 aa7.73□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ZNF318Q5VUA4 2279 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 C2orf71A6NGG8 1288 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TMEM189-UBE2V1I3L0A0 370 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SMAPO00193 183 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TULP2O00295 520 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CYB561D2O14569 222 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 APOL1O14791 398 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 RASGRF2O14827 1237 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 XPO1O14980 1071 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 EIF3HO15372 352 aaKnown RBP eCLIP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 RGS16O15492 202 aaPredicted RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PAPSS1O43252 624 aaPredicted RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 HCRTO43612 131 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 DAB1O75553 588 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 GRAP2O75791 330 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 AGTP01019 485 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 IFNB1P01574 187 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 RPL17P18621 184 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TGM2P21980 687 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TKTP29401 623 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ATP5DP30049 168 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 HPDP32754 393 aaPredicted RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CHKAP35790 457 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 RPL34P49207 117 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ATP1A2P50993 1020 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ARSEP51690 589 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 LILRA4P59901 499 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PPP2R2AP63151 447 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ATP11AP98196 1134 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 HYAL1Q12794 435 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 GPS1Q13098 491 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SLC29A2Q14542 456 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 MORF4L2Q15014 288 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 OASLQ15646 514 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 C15orf59Q2T9L4 293 aaPredicted RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CCDC14Q49A88 953 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 BOLA3Q53S33 107 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 KCNT1Q5JUK3 1230 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 EFHC1Q5JVL4 640 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 RTP2Q5QGT7 225 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 C6orf118Q5T5N4 469 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 EMC10Q5UCC4 262 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TRNP1Q6NT89 227 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 HIBCHQ6NVY1 386 aaPredicted RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SCYL2Q6P3W7 929 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PRSS55Q6UWB4 352 aaPredicted RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ARCQ7LC44 396 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PCGF5Q86SE9 256 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 OSTM1Q86WC4 334 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TMEM86AQ8N2M4 240 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ZCCHC9Q8N567 271 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 B3GALNT2Q8NCR0 500 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SLC2A14Q8TDB8 520 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 FAM172AQ8WUF8 416 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 RSAD2Q8WXG1 361 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TLCD1Q96CP7 247 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PGM2Q96G03 612 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms