RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 RABGGTBP53611 331 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 ATXN1P54253 815 aaKnown RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 ARPP19P56211 112 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 DSG1Q02413 1049 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 CREMQ03060 361 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 DHX9Q08211 1270 aaKnown RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 ACBD5Q5T8D3 534 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 MSANTD2Q6P1R3 559 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 DARS2Q6PI48 645 aaKnown RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 TMEM173Q86WV6 379 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 ATAD1Q8NBU5 361 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 BCL7CQ8WUZ0 217 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 RIN2Q8WYP3 895 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 EDEM1Q92611 657 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 SERPINB11Q96P15 392 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 EPAS1Q99814 870 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 OSBPL2Q9H1P3 480 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 CWC15Q9P013 229 aaKnown RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 HCSTQ9UBK5 93 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 SSX2IPQ9Y2D8 614 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 PLXNA3P51805 1871 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 SYNJ2BP-COX16A0A087WUM0 186 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 H7C0C1 242 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 EEF2KO00418 725 aaKnown RBP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 DNALI1O14645 258 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 IRAK2O43187 625 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 FGBP02675 491 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 RARGP13631 454 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 PECAM1P16284 738 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 ITGB8P26012 769 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 ATP5OP48047 213 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 PITX1P78337 314 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 DEFB103AP81534 67 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 PPP2R5DQ14738 602 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 MORF4L2Q15014 288 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 DDR2Q16832 855 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 MGAT5BQ3V5L5 792 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 IZUMO3Q5VZ72 239 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 CROCCP2Q86T23 111 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 DDX53Q86TM3 631 aaKnown RBP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 IQCKQ8N0W5 287 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 COLGALT1Q8NBJ5 622 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 RNF34Q969K3 372 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 PGLYRP2Q96PD5 576 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 HAPLN3Q96S86 360 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 CDK5RAP1Q96SZ6 601 aaKnown RBP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 YME1L1Q96TA2 773 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 FAM118BQ9BPY3 351 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 TMEM121Q9BTD3 319 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 TXLNGYQ9BZA5 131 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 TLR8Q9NR97 1041 aaKnown RBP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 COX16Q9P0S2 106 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 CALCOCO1Q9P1Z2 691 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 AFF4Q9UHB7 1163 aaKnown RBP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 TPX2Q9ULW0 747 aaKnown RBP16.12■□□□□ 0.17
COMMD4-210ENST00000564587 PCDHB12Q9Y5F1 795 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 CDY1Q9Y6F8 540 aa16.12■□□□□ 0.17
COMMD4-210ENST00000564587 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 NCAM2O15394 837 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 IFNB1P01574 187 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 URODP06132 367 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 CCR1P32246 355 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 PBX3P40426 434 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 CDR1P51861 262 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 ITGA8P53708 1063 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 PMS2P54278 862 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 EIF3BP55884 814 aaKnown RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 IFRD2Q12894 506 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 GPS1Q13098 491 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 EIF4EBP2Q13542 120 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 TRIP13Q15645 432 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 P3H1Q32P28 736 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 HIBCHQ6NVY1 386 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 PSRC1Q6PGN9 363 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 C1orf228Q6PIY5 440 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 RHBDF2Q6PJF5 856 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 PRSS55Q6UWB4 352 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 RNF19BQ6ZMZ0 732 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 RFX8Q6ZV50 586 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 TRMT10CQ7L0Y3 403 aaKnown RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 TAS1R1Q7RTX1 841 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 SCD5Q86SK9 330 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 TADA2BQ86TJ2 420 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 TAC4Q86UU9 113 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 HOOK3Q86VS8 718 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 ZNF276Q8N554 614 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 TSEN2Q8NCE0 465 aaKnown RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 PDZD8Q8NEN9 1154 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 OVCA2Q8WZ82 227 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 FBXO32Q969P5 355 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 RTP4Q96DX8 246 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 B3GALT6Q96L58 329 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 SEPT5Q99719 369 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-210ENST00000564587 PHACTR1Q9C0D0 580 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 BRD8Q9H0E9 1235 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 ARHGEF38Q9NXL2 777 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 PAK5Q9P286 719 aa16.11■□□□□ 0.17
COMMD4-210ENST00000564587 SHOC2Q9UQ13 582 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms