RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 C10orf120Q5SQS8 335 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 HES3Q5TGS1 186 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 RRAGBQ5VZM2 374 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 PAQR9Q6ZVX9 377 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 USP49Q70CQ1 688 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 ANKS1BQ7Z6G8 1248 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 SPDYE1Q8NFV5 336 aaPredicted RBP7.71□□□□□ -1.18
VPS4A-203ENST00000564399 OR2T3Q8NH03 318 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 SNIP1Q8TAD8 396 aaKnown RBP7.71□□□□□ -1.18
VPS4A-203ENST00000564399 SORCS1Q8WY21 1168 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 JAKMIP2Q96AA8 810 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 CCDC127Q96BQ5 260 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 BIRC7Q96CA5 298 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 DNAJC19Q96DA6 116 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 TMEM176AQ96HP8 235 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 EPSTI1Q96J88 318 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 TNIP3Q96KP6 325 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 LGMNQ99538 433 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 ACE2Q9BYF1 805 aaPredicted RBP7.71□□□□□ -1.18
VPS4A-203ENST00000564399 FGFBP2Q9BYJ0 223 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 BTBD1Q9H0C5 482 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 KIAA1586Q9HCI6 787 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 OSGEPQ9NPF4 335 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 OLFML3Q9NRN5 406 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 PANK4Q9NVE7 773 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 ELOVL2Q9NXB9 296 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 HSPBP1Q9NZL4 362 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 STK17AQ9UEE5 414 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 DNMT3LQ9UJW3 386 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 FBXO10Q9UK96 956 aa7.71□□□□□ -1.18
VPS4A-203ENST00000564399 COL5A1P20908 1838 aaPredicted RBP7.71□□□□□ -1.18
VPS4A-203ENST00000564399 PLXNA2O75051 1894 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.7□□□□□ -1.18
VPS4A-203ENST00000564399 A0A1B0GTQ1 180 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 ERVH48-1M5A8F1 160 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 BRINP1O60477 761 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 EIF5BO60841 1220 aaKnown RBP7.7□□□□□ -1.18
VPS4A-203ENST00000564399 PENKP01210 267 aaPredicted RBP7.7□□□□□ -1.18
VPS4A-203ENST00000564399 CYBBP04839 570 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 HMBSP08397 361 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 RARGP13631 454 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 ACTN2P35609 894 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 CHKAP35790 457 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 CTSKP43235 329 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 BCAT1P54687 386 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 MAP3K7CLP57077 242 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 KCNC4Q03721 635 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 TLE3Q04726 772 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 KCNH2Q12809 1159 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 EIF4HQ15056 248 aaKnown RBP7.7□□□□□ -1.18
VPS4A-203ENST00000564399 FNDC3BQ53EP0 1204 aaKnown RBP7.7□□□□□ -1.18
VPS4A-203ENST00000564399 PCSK4Q6UW60 755 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 SCARA5Q6ZMJ2 495 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 Q6ZNB5 142 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 STXBP4Q6ZWJ1 553 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 ACOT1Q86TX2 421 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 SPACA3Q8IXA5 215 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 FUKQ8N0W3 1084 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 EID2Q8N6I1 236 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 FAM181AQ8N9Y4 354 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 ZMIZ2Q8NF64 920 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 GANCQ8TET4 914 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 SYAP1Q96A49 352 aaPredicted RBP7.7□□□□□ -1.18
VPS4A-203ENST00000564399 SKA1Q96BD8 255 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 NAF1Q96HR8 494 aaKnown RBP7.7□□□□□ -1.18
VPS4A-203ENST00000564399 CGRRF1Q99675 332 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 SMOQ99835 787 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 SMYD3Q9H7B4 428 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 CYLDQ9NQC7 956 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 ZNF510Q9Y2H8 683 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 DOCK9Q9BZ29 2069 aa7.7□□□□□ -1.18
VPS4A-203ENST00000564399 A0A1W2PQH9 124 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 FAM47DPA6NHR8 397 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 VILLO15195 856 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 CYP26A1O43174 497 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 PAPSS1O43252 624 aaPredicted RBP7.69□□□□□ -1.18
VPS4A-203ENST00000564399 TIMM44O43615 452 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 TSPAN3O60637 253 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 STC2O76061 302 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 BEST1O76090 585 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 DNTTP04053 509 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 CCDC130P13994 396 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 GLDCP23378 1020 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 ADORA2BP29275 332 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 ATICP31939 592 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 TXLNAP40222 546 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 ACADVLP49748 655 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 CYP2J2P51589 502 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 RACK1P63244 317 aaKnown RBP7.69□□□□□ -1.18
VPS4A-203ENST00000564399 RHDQ02161 417 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 BIRC3Q13489 604 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 SNRNP35Q16560 246 aaKnown RBP7.69□□□□□ -1.18
VPS4A-203ENST00000564399 TTC31Q49AM3 519 aaPredicted RBP7.69□□□□□ -1.18
VPS4A-203ENST00000564399 ZNF667Q5HYK9 610 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 ARHGAP40Q5TG30 622 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 BROXQ5VW32 411 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 FYB2Q5VWT5 728 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 FBXL19Q6PCT2 694 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 KLHDC10Q6PID8 442 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 TADA2BQ86TJ2 420 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms