RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 KMT2EQ8IZD2 1858 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 M0QYT0 321 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 NARSO43776 548 aaKnown RBP17.65■□□□□ 0.42
CMTM3-208ENST00000564247 CEBPBP17676 345 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 ATP5C1P36542 298 aaKnown RBP17.65■□□□□ 0.42
CMTM3-208ENST00000564247 ETF1P62495 437 aaKnown RBP17.65■□□□□ 0.42
CMTM3-208ENST00000564247 CDO1Q16878 200 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 C10orf120Q5SQS8 335 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 PARM1Q6UWI2 310 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 STRADAQ7RTN6 431 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 SLC35F6Q8N357 371 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 LRRC57Q8N9N7 239 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 TCEAL4Q96EI5 215 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 NPY6RQ99463 290 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 LRRC3Q9BY71 257 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 ATXN3LQ9H3M9 355 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 FAM204AQ9H8W3 233 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 OSER1Q9NX31 292 aa17.65■□□□□ 0.42
CMTM3-208ENST00000564247 ZNF500O60304 480 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-208ENST00000564247 TLR5O60602 858 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 TRUB2O95900 331 aaKnown RBP17.64■□□□□ 0.41
CMTM3-208ENST00000564247 SRFP11831 508 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 COMTP21964 271 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 CCR2P41597 374 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 TUBP50607 506 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 DEUP1Q05D60 604 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 C15orf59Q2T9L4 293 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-208ENST00000564247 ARHGAP15Q53QZ3 475 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 TRNP1Q6NT89 227 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 MSANTD2Q6P1R3 559 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 SCYL2Q6P3W7 929 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 TMC8Q8IU68 726 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 DQX1Q8TE96 717 aaKnown RBP17.64■□□□□ 0.41
CMTM3-208ENST00000564247 FAM172AQ8WUF8 416 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 CENPIQ92674 756 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-208ENST00000564247 NT5C3BQ969T7 300 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 C16orf45Q96MC5 204 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-208ENST00000564247 TBCBQ99426 244 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 RPP25Q9BUL9 199 aaKnown RBP17.64■□□□□ 0.41
CMTM3-208ENST00000564247 KCNH6Q9H252 994 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 IL21Q9HBE4 155 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 JRKLQ9Y4A0 524 aa17.64■□□□□ 0.41
CMTM3-208ENST00000564247 MOSPD3O75425 235 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 ENDOD1O94919 500 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 PDGFBP01127 241 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-208ENST00000564247 CASQ1P31415 396 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 RDXP35241 583 aaKnown RBP17.63■□□□□ 0.41
CMTM3-208ENST00000564247 PCK1P35558 622 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 PGFP49763 221 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 KPNA1P52294 538 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-208ENST00000564247 ZNF252P-AS1Q0IIN9 211 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 EFEMP1Q12805 493 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 NME3Q13232 169 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 KLHDC10Q6PID8 442 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 POTEHQ6S545 545 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 NYAP1Q6ZVC0 841 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 ST13P5Q8NFI4 369 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-208ENST00000564247 RNF34Q969K3 372 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 PGAP3Q96FM1 320 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-208ENST00000564247 SERPINB11Q96P15 392 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 GOLPH3Q9H4A6 298 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 CCSER2Q9H7U1 834 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 SLC2A4RGQ9NR83 387 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 DDIT4Q9NX09 232 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 WNT16Q9UBV4 365 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 ZMYM5Q9UJ78 669 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 DNMT3LQ9UJW3 386 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 NUDT5Q9UKK9 219 aa17.63■□□□□ 0.41
CMTM3-208ENST00000564247 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.63■□□□□ 0.41
CMTM3-208ENST00000564247 SYNJ2BP-COX16A0A087WUM0 186 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 A0A1W2PRU2 124 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 SOBPA7XYQ1 873 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 MIF4GDA9UHW6 222 aaKnown RBP17.62■□□□□ 0.41
CMTM3-208ENST00000564247 PRPSAP2O60256 369 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 FTCDO95954 541 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 TNNT1P13805 278 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 PFKLP17858 780 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 DDX6P26196 483 aaKnown RBP eCLIP17.62■□□□□ 0.41
CMTM3-208ENST00000564247 RPS6KA1Q15418 735 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 MEI1Q5TIA1 1274 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 GAREM2Q75VX8 874 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 TMEM150AQ86TG1 271 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 NT5DC3Q86UY8 548 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 RHOT1Q8IXI2 618 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 UBL4BQ8N7F7 174 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 ADAM32Q8TC27 787 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 TRPC7Q9HCX4 862 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 MARCH2Q9P0N8 246 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 COX16Q9P0S2 106 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 SFMBT1Q9UHJ3 866 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 DNAI1Q9UI46 699 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 RASAL2Q9UJF2 1139 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 FBXL21Q9UKT6 434 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 HYOU1Q9Y4L1 999 aa17.62■□□□□ 0.41
CMTM3-208ENST00000564247 MUC6Q6W4X9 2439 aa17.61■□□□□ 0.41
CMTM3-208ENST00000564247 CCDC66A2RUB6 948 aa17.61■□□□□ 0.41
CMTM3-208ENST00000564247 CTAGE9A4FU28 777 aa17.61■□□□□ 0.41
CMTM3-208ENST00000564247 NRG2O14511 850 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-208ENST00000564247 LRCH4O75427 683 aa17.61■□□□□ 0.41
CMTM3-208ENST00000564247 ECI2O75521 394 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms