RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TCF4P15884 667 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 IL1R2P27930 398 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 CXCR5P32302 372 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 ARL4AP40617 200 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 PGFP49763 221 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 PEX5P50542 639 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 CDH6P55285 790 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 HYAL1Q12794 435 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 PPP2R5EQ16537 467 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 DPYSL2Q16555 572 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 KCNT1Q5JUK3 1230 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 TMEM184AQ6ZMB5 413 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 DDX42Q86XP3 938 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLK3-214ENST00000564096 UNC45BQ8IWX7 931 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 CCDC185Q8N715 623 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 ATP6V0D2Q8N8Y2 350 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.31□□□□□ -0.28
CLK3-214ENST00000564096 MAIP1Q8WWC4 291 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 CAPZA3Q96KX2 299 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 PEBP4Q96S96 227 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 EPAS1Q99814 870 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 ZNF670Q9BS34 389 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 LRRC3Q9BY71 257 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 TKTL2Q9H0I9 626 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 SLITRK6Q9H5Y7 841 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 DHX35Q9H5Z1 703 aaKnown RBP13.31□□□□□ -0.28
CLK3-214ENST00000564096 ARHGEF38Q9NXL2 777 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 RCOR3Q9P2K3 495 aaPredicted RBP13.31□□□□□ -0.28
CLK3-214ENST00000564096 NUDT5Q9UKK9 219 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 FZD10Q9ULW2 581 aa13.31□□□□□ -0.28
CLK3-214ENST00000564096 ZNF487B1APH4 448 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 H3BRJ5 948 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 OLFM2O95897 454 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 HTR7P34969 479 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 PTPN7P35236 360 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 AVPR1AP37288 418 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 HARS2P49590 506 aaKnown RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 ATXN1P54253 815 aaKnown RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 CYP4F8P98187 520 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 ZNF211Q13398 564 aaPredicted RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 KCNC3Q14003 757 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 HABP4Q5JVS0 413 aaKnown RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 RARS2Q5T160 578 aaKnown RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 DCAF12L1Q5VU92 463 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 ANKRD54Q6NXT1 300 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 TMC5Q6UXY8 1006 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 GAREM2Q75VX8 874 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 TMEM150AQ86TG1 271 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 HS6ST3Q8IZP7 471 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 CEP112Q8N8E3 955 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 VN1R2Q8NFZ6 395 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 ACTRT1Q8TDG2 376 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 ZNF707Q96C28 371 aaPredicted RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 CALN1Q9BXU9 219 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 ADAM33Q9BZ11 813 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 TTYH1Q9H313 450 aaPredicted RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 HCFC1R1Q9NWW0 138 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 CALCOCO1Q9P1Z2 691 aa13.3□□□□□ -0.28
CLK3-214ENST00000564096 DNMT3BQ9UBC3 853 aaKnown RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 LSM7Q9UK45 103 aaKnown RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 TTC7AQ9ULT0 858 aaPredicted RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 MRPS23Q9Y3D9 190 aaKnown RBP13.3□□□□□ -0.28
CLK3-214ENST00000564096 C2orf78A6NCI8 922 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 SRGAP2O75044 1071 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 TBX18O95935 607 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 MOCS2O96007 188 aaPredicted RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 IGLV3-27P01718 113 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 FGGP02679 453 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 PYGMP11217 842 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 POU3F3P20264 500 aaPredicted RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 IGFBP4P22692 258 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 ADRA1BP35368 520 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 SLC11A2P49281 568 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 ITIH3Q06033 890 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 TFDP2Q14188 446 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 GRIN2CQ14957 1233 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 LONRF2Q1L5Z9 754 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 RAB6CQ53S08 254 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 ZC3H12AQ5D1E8 599 aaKnown RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 TFDP3Q5H9I0 405 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 PPP6R3Q5H9R7 873 aaPredicted RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 GPR158Q5T848 1215 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 TXNDC8Q6A555 127 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 TXNRD3NBQ6F5E7 133 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 CES5AQ6NT32 575 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 SPOCD1Q6ZMY3 1216 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 CYP4V2Q6ZWL3 525 aaPredicted RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 GRASPQ7Z6J2 395 aaPredicted RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 RASGEF1CQ8N431 466 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 ACSF2Q96CM8 615 aaPredicted RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 SLC39A13Q96H72 371 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 RPGRIP1Q96KN7 1286 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 BTN2A3PQ96KV6 586 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 FCRL2Q96LA5 508 aaPredicted RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 HAPLN3Q96S86 360 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 DDX50Q9BQ39 737 aaKnown RBP13.29□□□□□ -0.28
CLK3-214ENST00000564096 MAK16Q9BXY0 300 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms