RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 DCP2Q8IU60 420 aaKnown RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 CCNJLQ8IV13 435 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 GRIN3AQ8TCU5 1115 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 CPT1BQ92523 772 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 EXT2Q93063 718 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 BBS4Q96RK4 519 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 RANBP9Q96S59 729 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 RIT2Q99578 217 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 TMEM79Q9BSE2 394 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 TTYH3Q9C0H2 523 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 SLC6A17Q9H1V8 727 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 CUEDC2Q9H467 287 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 CAB39LQ9H9S4 337 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 UFSP2Q9NUQ7 469 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 DTLQ9NZJ0 730 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 IFT80Q9P2H3 777 aaPredicted RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 STX18Q9P2W9 335 aaKnown RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 ENOPH1Q9UHY7 261 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 SNX7Q9UNH6 387 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 DTNAQ9Y4J8 743 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 PMF1-BGLAPU3KQ54 211 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 AK9Q5TCS8 1911 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 DDX60Q8IY21 1712 aaKnown RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 DISP2A7MBM2 1401 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 ILVBLA1L0T0 632 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZNF98A6NK75 572 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZNF879B4DU55 563 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 DNM1LO00429 736 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 PCDH17O14917 1159 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 PPIP5K2O43314 1243 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 DGAT1O75907 488 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 IFNB1P01574 187 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 POLBP06746 335 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 CLTBP09497 229 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 MYCLP12524 364 aaPredicted RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 EIF4A3P38919 411 aaKnown RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 PSMC5P62195 406 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 TYRO3Q06418 890 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 ITKQ08881 620 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 TIGD2Q4W5G0 525 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 RINT1Q6NUQ1 792 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 ARFGAP1Q8N6T3 406 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 FSIP1Q8NA03 581 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 GAB3Q8WWW8 586 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 C7orf34Q96L11 122 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 CDK5RAP1Q96SZ6 601 aaKnown RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 BBS2Q9BXC9 721 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 FRMD8Q9BZ67 464 aaPredicted RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 MKRN2Q9H000 416 aaKnown RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 NDE1Q9NXR1 346 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 SOS2Q07890 1332 aaPredicted RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 RGPD3A6NKT7 1758 aaPredicted RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 RGPD4Q7Z3J3 1758 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 ARHGEF35A5YM69 484 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 GNAI3P08754 354 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 CPT1AP50416 773 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 CCT4P50991 539 aaKnown RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 C19orf57Q0VDD7 668 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 SCARB2Q14108 478 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 HABP2Q14520 560 aaPredicted RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 CNTD1Q8N815 330 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 C12orf50Q8NA57 414 aaPredicted RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 RNASE11Q8TAA1 199 aaKnown RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 TTC9Q92623 222 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 KRT35Q92764 455 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 C19orf60Q96EN9 201 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 DYDC2Q96IM9 177 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 SAV1Q9H4B6 383 aaPredicted RBP6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 KCNH4Q9UQ05 1017 aa6.11□□□□□ -1.43
TUBGCP4-207ENST00000563963 PCDH11XQ9BZA7 1347 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PCDH11YQ9BZA8 1340 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PDE4DIPQ5VU43 2346 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 A0A1B0GTQ1 180 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 LOC390937A0A1W2PQ73 354 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CAPN8A6NHC0 703 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 RRN3P2A6NIE6 340 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 GRIN3BO60391 1043 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CTNND1O60716 968 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZBTB11O95625 1053 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ADH1CP00326 375 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CYP11A1P05108 521 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ASNSP08243 561 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ETS2P15036 469 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 MAT2AP31153 395 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CRKP46108 304 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ABATP80404 500 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PCDH1Q08174 1060 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZNF177Q13360 481 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PIN1Q13526 163 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 STARD3Q14849 445 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 TMEM132BQ14DG7 1078 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 AANATQ16613 207 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 STX1AQ16623 288 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PXDC1Q5TGL8 231 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 WDR93Q6P2C0 686 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 GSTA5Q7RTV2 222 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CEP97Q8IW35 865 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 MLKLQ8NB16 471 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CHAC2Q8WUX2 184 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms