RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 FKBP15Q5T1M5 1219 aa32.05■■■□□ 2.72
CMTM4-204ENST00000563952 CAVIN1Q6NZI2 390 aaKnown RBP32.05■■■□□ 2.72
CMTM4-204ENST00000563952 C1orf131Q8NDD1 294 aaKnown RBP32.05■■■□□ 2.72
CMTM4-204ENST00000563952 ANKRD20A12PQ8NF67 263 aa32.05■■■□□ 2.72
CMTM4-204ENST00000563952 DDI1Q8WTU0 396 aa32.05■■■□□ 2.72
CMTM4-204ENST00000563952 NAA15Q9BXJ9 866 aaKnown RBP32.05■■■□□ 2.72
CMTM4-204ENST00000563952 PLCB1Q9NQ66 1216 aa32.05■■■□□ 2.72
CMTM4-204ENST00000563952 CAPN9O14815 690 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 TSPAN3O60637 253 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 RPP40O75818 363 aaKnown RBP32.04■■■□□ 2.72
CMTM4-204ENST00000563952 CISD3P0C7P0 127 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 KLK7P49862 253 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 DGKEP52429 567 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 TBX4P57082 545 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 CRY1Q16526 586 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 EOGTQ5NDL2 527 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 TMEM92Q6UXU6 159 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 FAM217AQ8IXS0 508 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 DQX1Q8TE96 717 aaKnown RBP32.04■■■□□ 2.72
CMTM4-204ENST00000563952 GAB3Q8WWW8 586 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 PPP1R13BQ96KQ4 1090 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 CPXM1Q96SM3 734 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 LHX5Q9H2C1 402 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 GMEB2Q9UKD1 530 aa32.04■■■□□ 2.72
CMTM4-204ENST00000563952 PTPRZ1P23471 2315 aaPredicted RBP32.04■■■□□ 2.72
CMTM4-204ENST00000563952 COPB1P53618 953 aaKnown RBP32.03■■■□□ 2.72
CMTM4-204ENST00000563952 ANO7Q6IWH7 933 aa32.03■■■□□ 2.72
CMTM4-204ENST00000563952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP32.03■■■□□ 2.72
CMTM4-204ENST00000563952 ADAM32Q8TC27 787 aa32.03■■■□□ 2.72
CMTM4-204ENST00000563952 NOX5Q96PH1 765 aa32.03■■■□□ 2.72
CMTM4-204ENST00000563952 TRIM62Q9BVG3 475 aa32.03■■■□□ 2.72
CMTM4-204ENST00000563952 PDCL3Q9H2J4 239 aa32.03■■■□□ 2.72
CMTM4-204ENST00000563952 CEP83Q9Y592 693 aa32.03■■■□□ 2.72
CMTM4-204ENST00000563952 EML5Q05BV3 1969 aa32.03■■■□□ 2.72
CMTM4-204ENST00000563952 PRRT4C9JH25 899 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 ADAM23O75077 832 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 IGLV3-27P01718 113 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 HNRNPLP14866 589 aaKnown RBP eCLIP32.02■■■□□ 2.722e-9■□□□□ 9.9
CMTM4-204ENST00000563952 CDK11BP21127 795 aaKnown RBP32.02■■■□□ 2.72
CMTM4-204ENST00000563952 SYPL2Q5VXT5 272 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 EGFLAMQ63HQ2 1017 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 NUGGCQ68CJ6 796 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 LAIR1Q6GTX8 287 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 TRMT11Q7Z4G4 463 aaKnown RBP32.02■■■□□ 2.72
CMTM4-204ENST00000563952 UNC45BQ8IWX7 931 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 KIAA2013Q8IYS2 634 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 AOPEPQ8N6M6 819 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 KCNV2Q8TDN2 545 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 SERPINB11Q96P15 392 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 STK33Q9BYT3 514 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 POPDC2Q9HBU9 364 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 FAM207AQ9NSI2 230 aaPredicted RBP32.02■■■□□ 2.72
CMTM4-204ENST00000563952 EBF1Q9UH73 591 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 LIMA1Q9UHB6 759 aaKnown RBP32.02■■■□□ 2.72
CMTM4-204ENST00000563952 FBXO10Q9UK96 956 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 HCN2Q9UL51 889 aa32.02■■■□□ 2.72
CMTM4-204ENST00000563952 LATS1O95835 1130 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 CYP11B1P15538 503 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 WASP42768 502 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 YWHAZP63104 245 aaKnown RBP32.01■■■□□ 2.71
CMTM4-204ENST00000563952 TAF5Q15542 800 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 ANO6Q4KMQ2 910 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 MPPE1Q53F39 396 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 ADGRF1Q5T601 910 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 PIWIL1Q96J94 861 aaKnown RBP32.01■■■□□ 2.71
CMTM4-204ENST00000563952 TPSD1Q9BZJ3 242 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 NAT10Q9H0A0 1025 aaKnown RBP32.01■■■□□ 2.71
CMTM4-204ENST00000563952 GANQ9H2C0 597 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 STOML2Q9UJZ1 356 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 STARD13Q9Y3M8 1113 aa32.01■■■□□ 2.71
CMTM4-204ENST00000563952 OTOGLQ3ZCN5 2332 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 GPR179Q6PRD1 2367 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 F8VZ95 297 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 SLC11A2P49281 568 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 RING1Q06587 406 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 NCAPHQ15003 741 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 TAF3Q5VWG9 929 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 TAC4Q86UU9 113 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 PCMTD1Q96MG8 357 aaPredicted RBP32■■■□□ 2.71
CMTM4-204ENST00000563952 SYNCQ9H7C4 482 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 POLMQ9NP87 494 aaPredicted RBP32■■■□□ 2.71
CMTM4-204ENST00000563952 CLEC4EQ9ULY5 219 aa32■■■□□ 2.71
CMTM4-204ENST00000563952 MYO18AQ92614 2054 aaKnown RBP31.99■■■□□ 2.71
CMTM4-204ENST00000563952 EP300Q09472 2414 aaPredicted RBP31.99■■■□□ 2.71
CMTM4-204ENST00000563952 ALDH1A2O94788 518 aa31.99■■■□□ 2.71
CMTM4-204ENST00000563952 OR6B2Q6IFH4 312 aa31.99■■■□□ 2.71
CMTM4-204ENST00000563952 BEND5Q7L4P6 421 aa31.99■■■□□ 2.71
CMTM4-204ENST00000563952 FAM160A2Q8N612 972 aaPredicted RBP31.99■■■□□ 2.71
CMTM4-204ENST00000563952 FCRL2Q96LA5 508 aaPredicted RBP31.99■■■□□ 2.71
CMTM4-204ENST00000563952 TLR6Q9Y2C9 796 aa31.99■■■□□ 2.71
CMTM4-204ENST00000563952 SLC27A6Q9Y2P4 619 aa31.99■■■□□ 2.71
CMTM4-204ENST00000563952 GOLGA6L7A0A1B0GV03 622 aa31.98■■■□□ 2.71
CMTM4-204ENST00000563952 ERBB2P04626 1255 aa31.98■■■□□ 2.71
CMTM4-204ENST00000563952 ZNF18P17022 549 aa31.98■■■□□ 2.71
CMTM4-204ENST00000563952 NTSR1P30989 418 aa31.98■■■□□ 2.71
CMTM4-204ENST00000563952 POLR2FP61218 127 aaKnown RBP31.98■■■□□ 2.71
CMTM4-204ENST00000563952 FAM183BPQ6ZVS7 135 aa31.98■■■□□ 2.71
CMTM4-204ENST00000563952 RASSF3Q86WH2 238 aa31.98■■■□□ 2.71
CMTM4-204ENST00000563952 CHPFQ8IZ52 775 aa31.98■■■□□ 2.71
CMTM4-204ENST00000563952 MDGA1Q8NFP4 955 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms