RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 CAVIN2O95810 425 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 CYP1A1P04798 512 aaPredicted RBP12.83□□□□□ -0.36
FANCA-210ENST00000563318 GLI1P08151 1106 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 CISD3P0C7P0 127 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 CORO1AP31146 461 aaKnown RBP12.83□□□□□ -0.36
FANCA-210ENST00000563318 HOXA6P31267 233 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 HOXC13P31276 330 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 SOX5P35711 763 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 PITX1P78337 314 aaPredicted RBP12.83□□□□□ -0.36
FANCA-210ENST00000563318 FMO1Q01740 532 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 SATB1Q01826 763 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 UBXN1Q04323 297 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 GAD2Q05329 585 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 GOLGA8FQ08AF8 430 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 GOLGA8DPQ0D2H9 430 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 GRSF1Q12849 480 aaKnown RBP eCLIP12.83□□□□□ -0.36
FANCA-210ENST00000563318 NR1H3Q13133 447 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 NR1I3Q14994 352 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 FBXO43Q4G163 708 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 SLC26A9Q7LBE3 791 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 BNIPLQ7Z465 357 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 LUZP1Q86V48 1076 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 ZNF677Q86XU0 584 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 PARP9Q8IXQ6 854 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 TTC16Q8NEE8 873 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 ANKRD20A12PQ8NF67 263 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 SLC20A1Q8WUM9 679 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 AZIN2Q96A70 460 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 FCRL2Q96LA5 508 aaPredicted RBP12.83□□□□□ -0.36
FANCA-210ENST00000563318 ADAM33Q9BZ11 813 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 DCLK3Q9C098 648 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 NACA2Q9H009 215 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 MIS12Q9H081 205 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 IRF2BPLQ9H1B7 796 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 SFMBT1Q9UHJ3 866 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 NAALADL1Q9UQQ1 740 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 ZNF510Q9Y2H8 683 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 OTOGLQ3ZCN5 2332 aa12.83□□□□□ -0.36
FANCA-210ENST00000563318 TRIM24O15164 1050 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 RNF40O75150 1001 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 TULP3O75386 442 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 TPM2P07951 284 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 MMEP08473 750 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 CDK11BP21127 795 aaKnown RBP12.82□□□□□ -0.36
FANCA-210ENST00000563318 SCNN1AP37088 669 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 KIR2DL1P43626 348 aaPredicted RBP12.82□□□□□ -0.36
FANCA-210ENST00000563318 CDR2Q01850 454 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 PTP4A2Q12974 167 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 FAM133BQ5BKY9 247 aaKnown RBP12.82□□□□□ -0.36
FANCA-210ENST00000563318 ARTNQ5T4W7 220 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 FAM183BPQ6ZVS7 135 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 RSRC2Q7L4I2 434 aaKnown RBP12.82□□□□□ -0.36
FANCA-210ENST00000563318 TAC4Q86UU9 113 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 USP33Q8TEY7 942 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 NT5C3BQ969T7 300 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 PCDHB18PQ96TA0 734 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 POPDC2Q9HBU9 364 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 CD248Q9HCU0 757 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 NLRC4Q9NPP4 1024 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 ST7Q9NRC1 585 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 SPATA6Q9NWH7 488 aaPredicted RBP12.82□□□□□ -0.36
FANCA-210ENST00000563318 LSM7Q9UK45 103 aaKnown RBP12.82□□□□□ -0.36
FANCA-210ENST00000563318 STRIP2Q9ULQ0 834 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 MYO6Q9UM54 1294 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 MYOFQ9NZM1 2061 aa12.82□□□□□ -0.36
FANCA-210ENST00000563318 RIF1Q5UIP0 2472 aaKnown RBP12.81□□□□□ -0.36
FANCA-210ENST00000563318 IRAK2O43187 625 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 GFPT2O94808 682 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 KAT7O95251 611 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 UNGP13051 313 aaPredicted RBP12.81□□□□□ -0.36
FANCA-210ENST00000563318 KRT9P35527 623 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 GRIA2P42262 883 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 CCR3P51677 355 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 YWHAZP63104 245 aaKnown RBP12.81□□□□□ -0.36
FANCA-210ENST00000563318 NFKBIBQ15653 356 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 FIGNQ5HY92 759 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 E4F1Q66K89 784 aaPredicted RBP12.81□□□□□ -0.36
FANCA-210ENST00000563318 NADSYN1Q6IA69 706 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 IRF2BP2Q7Z5L9 587 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 XYLT1Q86Y38 959 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 DENND1CQ8IV53 801 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 TERB1Q8NA31 727 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 TMEM35BQ8NCS4 154 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 NEK11Q8NG66 645 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 RNF139Q8WU17 664 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 PNKPQ96T60 521 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
FANCA-210ENST00000563318 FAM86C1Q9NVL1 165 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 CALCOCO1Q9P1Z2 691 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 CLEC4EQ9ULY5 219 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 TLR6Q9Y2C9 796 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 SLC27A6Q9Y2P4 619 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 STARD13Q9Y3M8 1113 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 DMXL1Q9Y485 3027 aa12.81□□□□□ -0.36
FANCA-210ENST00000563318 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.8□□□□□ -0.36
FANCA-210ENST00000563318 HSF2BPO75031 334 aa12.8□□□□□ -0.36
FANCA-210ENST00000563318 DAB1O75553 588 aa12.8□□□□□ -0.36
FANCA-210ENST00000563318 HMBSP08397 361 aa12.8□□□□□ -0.36
FANCA-210ENST00000563318 NCAM1P13591 858 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms