RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 RGS7P49802 495 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 AQP5P55064 265 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.25
USB1-207ENST00000563149 BMPR2Q13873 1038 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 KCTD2Q14681 263 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 GSTA3Q16772 222 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 INSCQ1MX18 579 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 HEATR6Q6AI08 1181 aaKnown RBP13.52□□□□□ -0.25
USB1-207ENST00000563149 TTC30AQ86WT1 665 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 TREML1Q86YW5 311 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 CPB2Q96IY4 423 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 FAM161BQ96MY7 647 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 NAT9Q9BTE0 207 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 PLEKHA5Q9HAU0 1116 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 EIF2B3Q9NR50 452 aaKnown RBP13.52□□□□□ -0.25
USB1-207ENST00000563149 PCMTD2Q9NV79 361 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 ARMCX1Q9P291 453 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 RCOR3Q9P2K3 495 aaPredicted RBP13.52□□□□□ -0.25
USB1-207ENST00000563149 DCDC2Q9UHG0 476 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 CSADQ9Y600 493 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 A0A0G2JLL6 359 aaPredicted RBP13.51□□□□□ -0.25
USB1-207ENST00000563149 DPPA5A6NC42 116 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 SDR42E2A6NKP2 422 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 H3BRJ5 948 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 PAPSS1O43252 624 aaPredicted RBP13.51□□□□□ -0.25
USB1-207ENST00000563149 UGT1A9O60656 530 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 FKBP6O75344 327 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 SKAP2O75563 359 aaPredicted RBP13.51□□□□□ -0.25
USB1-207ENST00000563149 KLHL2O95198 593 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 MYL4P12829 197 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 AOC1P19801 751 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 SESN3P58005 492 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 MROH9Q5TGP6 573 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 TRMT10BQ6PF06 316 aaKnown RBP13.51□□□□□ -0.25
USB1-207ENST00000563149 SLC26A9Q7LBE3 791 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 PRRT2Q7Z6L0 340 aaPredicted RBP13.51□□□□□ -0.25
USB1-207ENST00000563149 MYLK4Q86YV6 388 aaPredicted RBP13.51□□□□□ -0.25
USB1-207ENST00000563149 ADGRF2Q8IZF7 708 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 C12orf29Q8N999 325 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 RBM15BQ8NDT2 890 aaKnown RBP13.51□□□□□ -0.25
USB1-207ENST00000563149 NRG4Q8WWG1 115 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 ATP2A3Q93084 1043 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 MMP19Q99542 508 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 UGT1A7Q9HAW7 530 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 UGT1A10Q9HAW8 530 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 UGT1A8Q9HAW9 530 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 GPRC5DQ9NZD1 345 aa13.51□□□□□ -0.25
USB1-207ENST00000563149 ASB14A6NK59 587 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 CYB561D2O14569 222 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 CXCL11O14625 94 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 PPP1R12AO14974 1030 aaPredicted RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 CSDE1O75534 798 aaKnown RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 DGKIO75912 1065 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 PDHA1P08559 390 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 ACADSBP45954 432 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 RPL34P49207 117 aaKnown RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 PSEN1P49768 467 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 ACTR3P61158 418 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 AP2B1P63010 937 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 NIPAL4Q0D2K0 466 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 LAMC2Q13753 1193 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 PRKG1Q13976 671 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 DCAF4L1Q3SXM0 396 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 PPP6R3Q5H9R7 873 aaPredicted RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 TMCO4Q5TGY1 634 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 TMEM154Q6P9G4 183 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 AAGABQ6PD74 315 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 KCNT2Q6UVM3 1135 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 STRADAQ7RTN6 431 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 ADGRG6Q86SQ4 1221 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 PSTKQ8IV42 348 aaKnown RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 FBXO16Q8IX29 292 aaPredicted RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 LRRC52Q8N7C0 313 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 PPP1R14CQ8TAE6 165 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 PIWIL2Q8TC59 973 aaKnown RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 COPS5Q92905 334 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 RILPQ96NA2 401 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 FERMT1Q9BQL6 677 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 DNAI2Q9GZS0 605 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 DHX35Q9H5Z1 703 aaKnown RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 AP4E1Q9UPM8 1137 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 PLXNA1Q9UIW2 1896 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 A0A0A0MRY4 1105 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 CCDC189A1A4V9 331 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 MAGEA13PA6NCF6 341 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 PGK2P07205 417 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 GRK2P25098 689 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 SLC10A2Q12908 348 aaPredicted RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 FASTKD1Q53R41 847 aaKnown RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 CES4AQ5XG92 561 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 SCUBE3Q8IX30 993 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 ULK2Q8IYT8 1036 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 MPP5Q8N3R9 675 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 TFB1MQ8WVM0 346 aaKnown RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 HTR3CQ8WXA8 447 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms