RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 DESI2Q9BSY9 194 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 CNPY3Q9BT09 278 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 LCMT1Q9UIC8 334 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 ANAPC7Q9UJX3 599 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 ZNF510Q9Y2H8 683 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 XIRP2A4UGR9 3374 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 SLC9A3R1O14745 358 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-207ENST00000563109 CORO1AP31146 461 aaKnown RBP19.58■□□□□ 0.72
RAB40C-207ENST00000563109 IFNAR2P48551 515 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 VAV2P52735 878 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 ZXDBP98169 803 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 GRM2Q14416 872 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 C15orf59Q2T9L4 293 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-207ENST00000563109 CCDC14Q49A88 953 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 ARHGAP29Q52LW3 1261 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 STRADAQ7RTN6 431 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 ADAMTS19Q8TE59 1207 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 FAM172AQ8WUF8 416 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 RSAD2Q8WXG1 361 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 PPP1R9BQ96SB3 815 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 TRMT61BQ9BVS5 477 aaKnown RBP19.58■□□□□ 0.72
RAB40C-207ENST00000563109 TBC1D14Q9P2M4 693 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 SLC12A6Q9UHW9 1150 aa19.58■□□□□ 0.72
RAB40C-207ENST00000563109 PRUNE2Q8WUY3 3088 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 CCP110O43303 1012 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 IGLV3-27P01718 113 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 ASGR2P07307 311 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 CCR1P32246 355 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 FCHO2Q0JRZ9 810 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 MTA1Q13330 715 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 PDGFRLQ15198 375 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 OTUD1Q5VV17 481 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-207ENST00000563109 RIN3Q8TB24 985 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 FCRL2Q96LA5 508 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-207ENST00000563109 PLA2G2FQ9BZM2 168 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.57■□□□□ 0.721e-6■■■□□ 16.2
RAB40C-207ENST00000563109 DUS2Q9NX74 493 aaKnown RBP19.57■□□□□ 0.72
RAB40C-207ENST00000563109 IP6K2Q9UHH9 426 aa19.57■□□□□ 0.72
RAB40C-207ENST00000563109 REXO2Q9Y3B8 237 aaKnown RBP19.57■□□□□ 0.72
RAB40C-207ENST00000563109 MYO1FO00160 1098 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 RNF8O76064 485 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 LATS1O95835 1130 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 TFE3P19532 575 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-207ENST00000563109 GDI1P31150 447 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 SLC11A2P49281 568 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 OGDHQ02218 1023 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 TDGQ13569 410 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 PPP2R5DQ14738 602 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 ZC3H12AQ5D1E8 599 aaKnown RBP19.56■□□□□ 0.72
RAB40C-207ENST00000563109 BRMS1LQ5PSV4 323 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 HTR3DQ70Z44 454 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 GJD3Q8N144 294 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 ATP6V0D2Q8N8Y2 350 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 SLC35G2Q8TBE7 412 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 OSCP1Q8WVF1 389 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 OTUB2Q96DC9 234 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 SLC39A13Q96H72 371 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 LRRC3BQ96PB8 259 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 NCAPGQ9BPX3 1015 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 RPP25Q9BUL9 199 aaKnown RBP19.56■□□□□ 0.72
RAB40C-207ENST00000563109 BRD9Q9H8M2 597 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 PIGVQ9NUD9 493 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 COL6A3P12111 3177 aa19.56■□□□□ 0.72
RAB40C-207ENST00000563109 A0A0A6YYK5 440 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-207ENST00000563109 SCAMP3O14828 347 aaKnown RBP19.55■□□□□ 0.72
RAB40C-207ENST00000563109 CHADO15335 359 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 MOCS2O96007 188 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-207ENST00000563109 CCDC175P0C221 793 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 NOP2P46087 812 aaKnown RBP19.55■□□□□ 0.72
RAB40C-207ENST00000563109 KIF5AQ12840 1032 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 PIGHQ14442 188 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-207ENST00000563109 ACAP1Q15027 740 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 Q6ZNB5 142 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 DENND1CQ8IV53 801 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 SLC44A3Q8N4M1 653 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 CENPIQ92674 756 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-207ENST00000563109 ATP2A3Q93084 1043 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 WBP2Q969T9 261 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 BTN2A3PQ96KV6 586 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 TRIM7Q9C029 511 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 WDCPQ9H6R7 721 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 SORCS3Q9UPU3 1222 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 ADGRG1Q9Y653 693 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 WNT6Q9Y6F9 365 aa19.55■□□□□ 0.72
RAB40C-207ENST00000563109 MTA2O94776 668 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 ENDOD1O94919 500 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 NFATC1O95644 943 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 CXCR3P49682 368 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 EIF4EBP2Q13542 120 aaPredicted RBP19.54■□□□□ 0.72
RAB40C-207ENST00000563109 TCEAL1Q15170 157 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 ARL13BQ3SXY8 428 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 BNIPLQ7Z465 357 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 FAM131BQ86XD5 332 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 RNF135Q8IUD6 432 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 BBS7Q8IWZ6 715 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 IRF7Q92985 503 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 CALR3Q96L12 384 aaKnown RBP19.54■□□□□ 0.72
RAB40C-207ENST00000563109 UHRF1Q96T88 793 aaPredicted RBP19.54■□□□□ 0.72
RAB40C-207ENST00000563109 DDX50Q9BQ39 737 aaKnown RBP19.54■□□□□ 0.72
RAB40C-207ENST00000563109 ADAM33Q9BZ11 813 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms