RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 MATKP42679 507 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 SULT1E1P49888 294 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 SGSHP51688 502 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 ZXDAP98168 799 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 MAMLD1Q13495 774 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 TRIP4Q15650 581 aaPredicted RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 SLC18A3Q16572 532 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 CCDC14Q49A88 953 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 ZC3H12AQ5D1E8 599 aaKnown RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 TMEM31Q5JXX7 168 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 ARTNQ5T4W7 220 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 ZNF318Q5VUA4 2279 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 NADSYN1Q6IA69 706 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 DNAJC24Q6P3W2 148 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 ALKBH5Q6P6C2 394 aaKnown RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 TXNDC11Q6PKC3 985 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 BEND5Q7L4P6 421 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 ZDHHC17Q8IUH5 632 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 DENND1CQ8IV53 801 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 ARFGAP1Q8N6T3 406 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 DEPDC1BQ8WUY9 529 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 OSCP1Q8WVF1 389 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 ATRIPQ8WXE1 791 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 NXPE3Q969Y0 559 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 BTBD6Q96KE9 485 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 MCEEQ96PE7 176 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 PANX2Q96RD6 677 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 DDX23Q9BUQ8 820 aaKnown RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 BRD9Q9H8M2 597 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 SLC2A4RGQ9NR83 387 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 HEBP1Q9NRV9 189 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 OLA1Q9NTK5 396 aaKnown RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 DUS2Q9NX74 493 aaKnown RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.2□□□□□ -0.78
CLK3-208ENST00000562626 CNOT8Q9UFF9 292 aaKnown RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 AGO1Q9UL18 857 aaKnown RBP10.2□□□□□ -0.78
CLK3-208ENST00000562626 CA14Q9ULX7 337 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 SNX10Q9Y5X0 201 aa10.2□□□□□ -0.78
CLK3-208ENST00000562626 CKAP5Q14008 2032 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 E2F8A0AVK6 867 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 RCCD1A6NED2 376 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 M0QYT0 321 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 GFRA2O00451 464 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 TRDMT1O14717 391 aaKnown RBP10.19□□□□□ -0.78
CLK3-208ENST00000562626 CAPN9O14815 690 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 CCP110O43303 1012 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 DCXO43602 365 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 AKR1B10O60218 316 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 KRT3P12035 628 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 GGCXP38435 758 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 IRAK1P51617 712 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 TBX4P57082 545 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 ATP11AP98196 1134 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 FOXK2Q01167 660 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 MESP2Q0VG99 397 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 NME3Q13232 169 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 CDO1Q16878 200 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 ARHGAP29Q52LW3 1261 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 FAM133BQ5BKY9 247 aaKnown RBP10.19□□□□□ -0.78
CLK3-208ENST00000562626 HTR3DQ70Z44 454 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 C12orf40Q86WS4 652 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 MSANTD4Q8NCY6 345 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 ACRBPQ8NEB7 543 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 GOLGA1Q92805 767 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 E2F7Q96AV8 911 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 PLD4Q96BZ4 506 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 VCPIP1Q96JH7 1222 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 CDK5RAP1Q96SZ6 601 aaKnown RBP10.19□□□□□ -0.78
CLK3-208ENST00000562626 SELENOOQ9BVL4 669 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 FAM204AQ9H8W3 233 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 C11orf16Q9NQ32 467 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 ZNHIT6Q9NWK9 470 aaKnown RBP10.19□□□□□ -0.78
CLK3-208ENST00000562626 DDIT4Q9NX09 232 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 WDR35Q9P2L0 1181 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 IMPACTQ9P2X3 320 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 STRIP2Q9ULQ0 834 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 SH3BP1Q9Y3L3 701 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 HBS1LQ9Y450 684 aaKnown RBP10.19□□□□□ -0.78
CLK3-208ENST00000562626 CACNA1IQ9P0X4 2223 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 CEP192Q8TEP8 1941 aa10.19□□□□□ -0.78
CLK3-208ENST00000562626 TMEM191CA6NGB0 347 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 KCNU1A8MYU2 1149 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 TRIM24O15164 1050 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 LCA5LO95447 670 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 CYP1A2P05177 515 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 TCF4P15884 667 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 PDGFRAP16234 1089 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 GPD1P21695 349 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 CD72P21854 359 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 IFNAR2P48551 515 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 HDAC4P56524 1084 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 COG7P83436 770 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 RUNX3Q13761 415 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 GSE1Q14687 1217 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 SLC25A52Q3SY17 297 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 LY6G5CQ5SRR4 150 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 RHBDF2Q6PJF5 856 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 ARCQ7LC44 396 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 TADA2BQ86TJ2 420 aa10.18□□□□□ -0.78
CLK3-208ENST00000562626 TMEM25Q86YD3 366 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms