RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 TMEM51Q9NW97 253 aa13.1□□□□□ -0.31
AC055717.2-201ENST00000561864 DTLQ9NZJ0 730 aa13.1□□□□□ -0.31
AC055717.2-201ENST00000561864 KANSL3Q9P2N6 904 aa13.1□□□□□ -0.31
AC055717.2-201ENST00000561864 PSMC3IPQ9P2W1 217 aaPredicted RBP13.1□□□□□ -0.31
AC055717.2-201ENST00000561864 CTNNAL1Q9UBT7 734 aa13.1□□□□□ -0.31
AC055717.2-201ENST00000561864 RSPH14Q9UHP6 348 aa13.1□□□□□ -0.31
AC055717.2-201ENST00000561864 NAALADL1Q9UQQ1 740 aa13.1□□□□□ -0.31
AC055717.2-201ENST00000561864 CLUHO75153 1309 aa13.1□□□□□ -0.31
AC055717.2-201ENST00000561864 TCRBV7S3A2A0A539 114 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 I3L4J1 428 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 ARVCFO00192 962 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 FYNP06241 537 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 AMPD1P23109 780 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 GCAP28676 217 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 ADRA1BP35368 520 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 HCAR3P49019 387 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 SEC24CP53992 1094 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 CACNA2D1P54289 1103 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 GEMIN4P57678 1058 aaKnown RBP13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 GPX6P59796 221 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 DPYSQ14117 519 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 PDK1Q15118 436 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 TMED2Q15363 201 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 ARL13BQ3SXY8 428 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 BBS9Q3SYG4 887 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 MSS51Q4VC12 460 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 NOMO2Q5JPE7 1267 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 SYPL2Q5VXT5 272 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 KCNT2Q6UVM3 1135 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 VSTM1Q6UX27 236 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 PDZD4Q76G19 769 aaPredicted RBP13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 BHLHA9Q7RTU4 235 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 NLRC5Q86WI3 1866 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 ANKMY2Q8IV38 441 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 PALM2Q8IXS6 379 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 VPS52Q8N1B4 723 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 FBXO36Q8NEA4 188 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 SLC7A14Q8TBB6 771 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 TFB1MQ8WVM0 346 aaKnown RBP13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 LINC01599Q8WXQ3 324 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 MAML1Q92585 1016 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 LRRC39Q96DD0 335 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 CHMP6Q96FZ7 201 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 KCNK16Q96T55 309 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 ACSS3Q9H6R3 686 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 WDR6Q9NNW5 1121 aaKnown RBP13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 PIGVQ9NUD9 493 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 TMEM30AQ9NV96 361 aa13.09□□□□□ -0.31
AC055717.2-201ENST00000561864 PTPRDP23468 1912 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 TMEM120BA0PK00 339 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 KBTBD13C9JR72 458 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 EEF2KO00418 725 aaKnown RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 PPP1R12AO14974 1030 aaPredicted RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 GSTA2P09210 222 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 USP17L7P0C7H9 530 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 NCAM1P13591 858 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 BRAFP15056 766 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 SELPP16109 830 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 IBSPP21815 317 aaPredicted RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 FDFT1P37268 417 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 SLC18A1P54219 525 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 PITX1P78337 314 aaPredicted RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 GAD2Q05329 585 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 SLC10A2Q12908 348 aaPredicted RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 SEMA3BQ13214 749 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 NME3Q13232 169 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 SEMA5AQ13591 1074 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 MBTPS1Q14703 1052 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 PRKD1Q15139 912 aaPredicted RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 PAN2Q504Q3 1202 aaKnown RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 CLLU1OSQ5K130 101 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 ARHGEF18Q6ZSZ5 1173 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 RFX8Q6ZV50 586 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 LRRC8DQ7L1W4 858 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 RTN4RL1Q86UN2 441 aaPredicted RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 TRABD2AQ86V40 505 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 SPATA2LQ8IUW3 424 aaPredicted RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 PYROXD2Q8N2H3 581 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 HTR3CQ8WXA8 447 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 WDR83Q9BRX9 315 aaKnown RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 DHRS4Q9BTZ2 278 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 ZMYND15Q9H091 742 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 ELAC1Q9H777 363 aaKnown RBP13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 TMEM161AQ9NX61 479 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 RABGEF1Q9UJ41 708 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 FBXW11Q9UKB1 542 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 TEX264Q9Y6I9 313 aa13.08□□□□□ -0.32
AC055717.2-201ENST00000561864 SYNJ2BP-COX16A0A087WUM0 186 aa13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 A0A0A0MRY4 1105 aa13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 POC1B-GALNT4F8VUJ3 575 aa13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 DCLK1O15075 740 aa13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 MFSD11O43934 449 aa13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 OPHN1O60890 802 aa13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 FKTNO75072 461 aa13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 BANF1O75531 89 aa13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 HSPA8P11142 646 aaKnown RBP13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 DRD4P21917 467 aa13.07□□□□□ -0.32
AC055717.2-201ENST00000561864 BDNFP23560 247 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms