RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SLC26A4O43511 780 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 SORBS2O94875 1100 aaKnown RBP19.2■□□□□ 0.66
RAB40C-206ENST00000561781 MT-ND3P03897 115 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 P4HA1P13674 534 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 MAPK4P31152 587 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 NDST2P52849 883 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 GPX6P59796 221 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 TXNL4AP83876 142 aaKnown RBP19.2■□□□□ 0.66
RAB40C-206ENST00000561781 FMO1Q01740 532 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 LILRB4Q8NHJ6 448 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 FAM151AQ8WW52 585 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 VPS51Q9UID3 782 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 A0A1B0GTW7 788 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 RSL1D1O76021 490 aaKnown RBP19.2■□□□□ 0.66
RAB40C-206ENST00000561781 ITGBL1O95965 494 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-206ENST00000561781 BMXP51813 675 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 WASHC5Q12768 1159 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 BFSP1Q12934 665 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 LRP8Q14114 963 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 SPCS2Q15005 226 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 ZYXQ15942 572 aaKnown RBP19.2■□□□□ 0.66
RAB40C-206ENST00000561781 NFIL3Q16649 462 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 PUS10Q3MIT2 529 aaKnown RBP19.2■□□□□ 0.66
RAB40C-206ENST00000561781 WDR45BQ5MNZ6 344 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 SPERTQ8NA61 448 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 PDZD8Q8NEN9 1154 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 ACAP3Q96P50 834 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 PAFAH2Q99487 392 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 KLHL25Q9H0H3 589 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 FBXO9Q9UK97 447 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-206ENST00000561781 AP4S1Q9Y587 144 aa19.2■□□□□ 0.66
RAB40C-206ENST00000561781 DDX60LQ5H9U9 1706 aaKnown RBP19.19■□□□□ 0.66
RAB40C-206ENST00000561781 SDR42E2A6NKP2 422 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 IREB2P48200 963 aaKnown RBP19.19■□□□□ 0.66
RAB40C-206ENST00000561781 GPC3P51654 580 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 IGBP1P78318 339 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 TNFAIP1Q13829 316 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 TFDP1Q14186 410 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 XKR5Q6UX68 686 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 EEPD1Q7L9B9 569 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 CRLF3Q8IUI8 442 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 ZNF280CQ8ND82 737 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 RMND5BQ96G75 393 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-206ENST00000561781 CDH19Q9H159 772 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 RIMS3Q9UJD0 308 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 FOCADQ5VW36 1801 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 PPP1R11O60927 126 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-206ENST00000561781 ENO2P09104 434 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-206ENST00000561781 ETS1P14921 441 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 SPIRE1Q08AE8 756 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 TIGD2Q4W5G0 525 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 CPSF7Q8N684 471 aaKnown RBP19.19■□□□□ 0.66
RAB40C-206ENST00000561781 MED30Q96HR3 178 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 ZNF512Q96ME7 567 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-206ENST00000561781 CAAP1Q9H8G2 361 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 PNPLA3Q9NST1 481 aa19.19■□□□□ 0.66
RAB40C-206ENST00000561781 SIPA1L1O43166 1804 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 GOLGA8CPA6NN73 597 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 H0YJX3 145 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 GIPC1O14908 333 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 EIF3DO15371 548 aaKnown RBP eCLIP19.18■□□□□ 0.66
RAB40C-206ENST00000561781 FAM189A1O60320 539 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 CAPNS1P04632 268 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 SSTR1P30872 391 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 HTRA3P83110 453 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 OXA1LQ15070 435 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 FAM83AQ86UY5 434 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 DEFB107AQ8IZN7 70 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 ZNF641Q96N77 438 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-206ENST00000561781 WRNIP1Q96S55 665 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 CYP4F11Q9HBI6 524 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 SEPT3Q9UH03 358 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 SLC8A2Q9UPR5 921 aa19.18■□□□□ 0.66
RAB40C-206ENST00000561781 TOMM70O94826 608 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 BMP3P12645 472 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 GPS1Q13098 491 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 ITGADQ13349 1161 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 MORF4L2Q15014 288 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 SIGIRRQ6IA17 410 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 TTC30AQ86WT1 665 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 SIX5Q8N196 739 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 MYCT1Q8N699 235 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 MINDY2Q8NBR6 621 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 ATP2A3Q93084 1043 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 MAELQ96JY0 434 aaKnown RBP19.17■□□□□ 0.66
RAB40C-206ENST00000561781 ANO3Q9BYT9 981 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 AGPAT3Q9NRZ7 376 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 CRNNQ9UBG3 495 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-206ENST00000561781 BCAP29Q9UHQ4 241 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 RNF11Q9Y3C5 154 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 CLUHO75153 1309 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 A0A1W2PQ67 120 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 CENPBD1B2RD01 187 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 ENTPD3O75355 529 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 ATE1O95260 518 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 ALOX5P09917 674 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 TTKP33981 857 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 ARSEP51690 589 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 TMPRSS15P98073 1019 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 STX3Q13277 289 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms