RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 ARL14EPQ8N8R7 260 aaPredicted RBP13.17□□□□□ -0.3
CMTM4-203ENST00000561680 MAB21L3Q8N8X9 362 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 SMRP1Q8NCR6 262 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 NTAN1Q96AB6 310 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 SLC39A13Q96H72 371 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 HES6Q96HZ4 224 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 ZFRQ96KR1 1074 aaKnown RBP13.17□□□□□ -0.3
CMTM4-203ENST00000561680 FCRL2Q96LA5 508 aaPredicted RBP13.17□□□□□ -0.3
CMTM4-203ENST00000561680 TLR10Q9BXR5 811 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 NACA2Q9H009 215 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 TASP1Q9H6P5 420 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.17□□□□□ -0.34e-7■■□□□ 14.2
CMTM4-203ENST00000561680 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 PACSIN2Q9UNF0 486 aaPredicted RBP13.17□□□□□ -0.3
CMTM4-203ENST00000561680 MRPS23Q9Y3D9 190 aaKnown RBP13.17□□□□□ -0.3
CMTM4-203ENST00000561680 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
CMTM4-203ENST00000561680 JRKLQ9Y4A0 524 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 KIAA1549LQ6ZVL6 1849 aa13.17□□□□□ -0.3
CMTM4-203ENST00000561680 NYNRINQ9P2P1 1898 aaKnown RBP13.16□□□□□ -0.3
CMTM4-203ENST00000561680 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 TICRRQ7Z2Z1 1910 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 SLC12A8A0AV02 714 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 CCDC66A2RUB6 948 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 MIF4GDA9UHW6 222 aaKnown RBP13.16□□□□□ -0.3
CMTM4-203ENST00000561680 PRPSAP2O60256 369 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 TUBB4AP04350 444 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 HDCP19113 662 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 FSHRP23945 695 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 MTHFRP42898 656 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 SSR1P43307 286 aaKnown RBP13.16□□□□□ -0.3
CMTM4-203ENST00000561680 MARCKSL1P49006 195 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 KPNA1P52294 538 aaPredicted RBP13.16□□□□□ -0.3
CMTM4-203ENST00000561680 AIF1P55008 147 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 TBX4P57082 545 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 RING1Q06587 406 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 SCAPQ12770 1279 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
CMTM4-203ENST00000561680 BRMS1LQ5PSV4 323 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 TXNRD3NBQ6F5E7 133 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 EP400NLQ6ZTU2 488 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 RHOT1Q8IXI2 618 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 TEKT4Q8WW24 435 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 ING5Q8WYH8 240 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 KRT35Q92764 455 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 PLD4Q96BZ4 506 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 RIPOR3Q96MK2 946 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 SNRNP25Q9BV90 132 aaKnown RBP13.16□□□□□ -0.3
CMTM4-203ENST00000561680 KLF16Q9BXK1 252 aaPredicted RBP13.16□□□□□ -0.3
CMTM4-203ENST00000561680 SLC46A2Q9BY10 475 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 ARHGEF38Q9NXL2 777 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 PCSK1NQ9UHG2 260 aa13.16□□□□□ -0.3
CMTM4-203ENST00000561680 COL4A3Q01955 1670 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.15□□□□□ -0.3
CMTM4-203ENST00000561680 I6L893 689 aaPredicted RBP13.15□□□□□ -0.3
CMTM4-203ENST00000561680 DDX3YO15523 660 aaKnown RBP13.15□□□□□ -0.3
CMTM4-203ENST00000561680 ATP1A1P05023 1023 aaKnown RBP13.15□□□□□ -0.3
CMTM4-203ENST00000561680 CKMP06732 381 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 KRT7P08729 469 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 SLC2A3P11169 496 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 CCR1P32246 355 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 GJC1P36383 396 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 COG7P83436 770 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 ZC3H12AQ5D1E8 599 aaKnown RBP13.15□□□□□ -0.3
CMTM4-203ENST00000561680 ATAT1Q5SQI0 421 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 NUGGCQ68CJ6 796 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 SCYL2Q6P3W7 929 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 POTEHQ6S545 545 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 SYT10Q6XYQ8 523 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 PSTKQ8IV42 348 aaKnown RBP13.15□□□□□ -0.3
CMTM4-203ENST00000561680 NPAS3Q8IXF0 933 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 CMTM8Q8IZV2 173 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 ALG3Q92685 438 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 CYP2S1Q96SQ9 504 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 NAPGQ99747 312 aaPredicted RBP13.15□□□□□ -0.3
CMTM4-203ENST00000561680 SLITRK6Q9H5Y7 841 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 WDCPQ9H6R7 721 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 UBE2ZQ9H832 354 aaPredicted RBP13.15□□□□□ -0.3
CMTM4-203ENST00000561680 ZWILCHQ9H900 591 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
CMTM4-203ENST00000561680 DNAI1Q9UI46 699 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 CD207Q9UJ71 328 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 FZD10Q9ULW2 581 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 ARHGAP26Q9UNA1 814 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 PCDHA3Q9Y5H8 950 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 CPQQ9Y646 472 aa13.15□□□□□ -0.3
CMTM4-203ENST00000561680 CTAGE9A4FU28 777 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 KCNU1A8MYU2 1149 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 ENC1O14682 589 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 STC2O76061 302 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 APOEP02649 317 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 RARAP10276 462 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 TNNT1P13805 278 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 WEE1P30291 646 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 ADRA1BP35368 520 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 AVPR1AP37288 418 aa13.14□□□□□ -0.31
CMTM4-203ENST00000561680 PEX5P50542 639 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms