RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 CCDC26Q8TAB7 109 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 FAM172AQ8WUF8 416 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 BCL7CQ8WUZ0 217 aaPredicted RBP7.84□□□□□ -1.15
TPM1-231ENST00000561395 RAPGEF5Q92565 580 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 CENPIQ92674 756 aaPredicted RBP7.84□□□□□ -1.15
TPM1-231ENST00000561395 CFAP57Q96MR6 1250 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 RUNDC3BQ96NL0 473 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 SLC2A13Q96QE2 648 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 PEBP4Q96S96 227 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 NCAPGQ9BPX3 1015 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 DDX23Q9BUQ8 820 aaKnown RBP7.84□□□□□ -1.15
TPM1-231ENST00000561395 OSBPL8Q9BZF1 889 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 ULBP1Q9BZM6 244 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 ZCWPW1Q9H0M4 648 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 ZWILCHQ9H900 591 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 LRRC4Q9HBW1 653 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 ARFGAP3Q9NP61 516 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 PNPLA8Q9NP80 782 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 DMAP1Q9NPF5 467 aaPredicted RBP7.84□□□□□ -1.15
TPM1-231ENST00000561395 SCUBE2Q9NQ36 999 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 PCYOX1Q9UHG3 505 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 FAN1Q9Y2M0 1017 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 PCDHB12Q9Y5F1 795 aa7.84□□□□□ -1.15
TPM1-231ENST00000561395 hCG_1818297A0A087WSY0 165 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 LRRD1A4D1F6 860 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 CARNS1A5YM72 827 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 FAM187AA6NFU0 413 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 ZSCAN5CA6NGD5 496 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 OR6C75A6NL08 312 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 GPR37O15354 613 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 TTI1O43156 1089 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 PRPSAP2O60256 369 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 SEC31AO94979 1220 aaKnown RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 ZBED1O96006 694 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 MYBL2P10244 700 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 HOXB8P17481 243 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 TFE3P19532 575 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 KDELR1P24390 212 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 COILP38432 576 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 PBX3P40426 434 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 MATKP42679 507 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 CDKN2BP42772 138 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 PTGIRP43119 386 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 HDAC4P56524 1084 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 ERVFC1P60507 584 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 ATP11AP98196 1134 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 DR1Q01658 176 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 GUCY2DQ02846 1103 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 ELAVL2Q12926 359 aaKnown RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 LLGL1Q15334 1064 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 CDO1Q16878 200 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 SMTNL2Q2TAL5 461 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 SLC25A52Q3SY17 297 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 MAP9Q49MG5 647 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 SLC39A12Q504Y0 691 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 RAB6CQ53S08 254 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 ODF2Q5BJF6 829 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 TFDP3Q5H9I0 405 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 BEND6Q5SZJ8 279 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 ZFYVE27Q5T4F4 411 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 FAM171A1Q5VUB5 890 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 OTUD1Q5VV17 481 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 PLPP4Q5VZY2 271 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 ZNF280DQ6N043 979 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 TTC27Q6P3X3 843 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 TMCO3Q6UWJ1 677 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 CCNI2Q6ZMN8 369 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 BHLHA9Q7RTU4 235 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 TMEM173Q86WV6 379 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 SPATA2LQ8IUW3 424 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 IFT20Q8IY31 132 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 SCML4Q8N228 414 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 DCLK2Q8N568 766 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 TDRD5Q8NAT2 981 aaKnown RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 CMASQ8NFW8 434 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 TEKT4Q8WW24 435 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 CASKIN2Q8WXE0 1202 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 NDRG1Q92597 394 aaKnown RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 MAGOHBQ96A72 148 aaKnown RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 ACSF2Q96CM8 615 aaPredicted RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 FUBP3Q96I24 572 aaKnown RBP eCLIP7.83□□□□□ -1.16
TPM1-231ENST00000561395 NECTIN4Q96NY8 510 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 KCNK16Q96T55 309 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 HEMGNQ9BXL5 484 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 ADAM33Q9BZ11 813 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 GPR62Q9BZJ7 368 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 DCLK3Q9C098 648 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 RAB6CQ9H0N0 254 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 CWH43Q9H720 699 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 LRRC19Q9H756 370 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 EPB41L5Q9HCM4 733 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 NGRNQ9NPE2 291 aaKnown RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 CNGB3Q9NQW8 809 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 GDF3Q9NR23 364 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 ZNF446Q9NWS9 450 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.83□□□□□ -1.16
TPM1-231ENST00000561395 PCSK1NQ9UHG2 260 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 AMACRQ9UHK6 382 aa7.83□□□□□ -1.16
TPM1-231ENST00000561395 RALYQ9UKM9 306 aaKnown RBP7.83□□□□□ -1.16
TPM1-231ENST00000561395 R3HDM2Q9Y2K5 976 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms