RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 BRMS1LQ5PSV4 323 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 DPY19L2P1Q6NXN4 242 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 MSANTD2Q6P1R3 559 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 OLFML1Q6UWY5 402 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 CHSY1Q86X52 802 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 XYLT1Q86Y38 959 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 FEZF2Q8TBJ5 459 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 ADAM32Q8TC27 787 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 DQX1Q8TE96 717 aaKnown RBP11.14□□□□□ -0.63
TPM1-229ENST00000561242 RXFP2Q8WXD0 754 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 ZFYVE19Q96K21 471 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 PANX2Q96RD6 677 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 SLC22A12Q96S37 553 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 BAG1Q99933 345 aaPredicted RBP11.14□□□□□ -0.63
TPM1-229ENST00000561242 P2RY13Q9BPV8 354 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
TPM1-229ENST00000561242 PLA2G2FQ9BZM2 168 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 SIK2Q9H0K1 926 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 SPHK2Q9NRA0 654 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 HEBP1Q9NRV9 189 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 NDRG2Q9UN36 371 aaKnown RBP11.14□□□□□ -0.63
TPM1-229ENST00000561242 CCL26Q9Y258 94 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 SIT1Q9Y3P8 196 aa11.14□□□□□ -0.63
TPM1-229ENST00000561242 PDCD11Q14690 1871 aaKnown RBP11.13□□□□□ -0.63
TPM1-229ENST00000561242 KANSL1LA0AUZ9 987 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 NEDD8-MDP1E9PL57 170 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 H0Y626 953 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 NARSO43776 548 aaKnown RBP11.13□□□□□ -0.63
TPM1-229ENST00000561242 PRPSAP2O60256 369 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 ACSL4O60488 711 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 STC2O76061 302 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 OLFM2O95897 454 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 CHRNB2P17787 502 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 DRD1P21728 446 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 NNMTP40261 264 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 MAGEA9P43362 315 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 DHCR24Q15392 516 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 SLC18A3Q16572 532 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 FBXO43Q4G163 708 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 ZC3H12AQ5D1E8 599 aaKnown RBP11.13□□□□□ -0.63
TPM1-229ENST00000561242 EFHC2Q5JST6 749 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 DGKKQ5KSL6 1271 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 ADGRF1Q5T601 910 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 RNF219Q5W0B1 726 aaPredicted RBP11.13□□□□□ -0.63
TPM1-229ENST00000561242 TRIM68Q6AZZ1 485 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 GRAMD4Q6IC98 578 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 HFE2Q6ZVN8 426 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 ARCQ7LC44 396 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 TRMT11Q7Z4G4 463 aaKnown RBP11.13□□□□□ -0.63
TPM1-229ENST00000561242 CCDC112Q8NEF3 446 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 CD101Q93033 1021 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 AZIN2Q96A70 460 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 CALR3Q96L12 384 aaKnown RBP11.13□□□□□ -0.63
TPM1-229ENST00000561242 MCEEQ96PE7 176 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 PNKPQ96T60 521 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 PCDHB18PQ96TA0 734 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 DNAJC7Q99615 494 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
TPM1-229ENST00000561242 TTYH3Q9C0H2 523 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 OSER1Q9NX31 292 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 IP6K2Q9UHH9 426 aa11.13□□□□□ -0.63
TPM1-229ENST00000561242 ANK1P16157 1881 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 SPECC1L-ADORA2AF8WAN1 911 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 SCAMP3O14828 347 aaKnown RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 MSI1O43347 362 aaKnown RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 TIMM44O43615 452 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 TSPAN3O60637 253 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 RRM1P23921 792 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 FCARP24071 287 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 HNRNPH3P31942 346 aaKnown RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 CETN2P41208 172 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 ST8SIA6P61647 398 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 GFPT1Q06210 699 aaPredicted RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 ZNF177Q13360 481 aaPredicted RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 CDH18Q13634 790 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 PIGHQ14442 188 aaPredicted RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 ACAP1Q15027 740 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 C2CD6Q53TS8 623 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 LY6G5CQ5SRR4 150 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 TTC39BQ5VTQ0 682 aaPredicted RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 ZNF354CQ86Y25 554 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 BBS7Q8IWZ6 715 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 RHOT2Q8IXI1 618 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 ADGRG2Q8IZP9 1017 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 NAT16Q8N8M0 369 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 HJURPQ8NCD3 748 aaPredicted RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 BHMTQ93088 406 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 RPRD1AQ96P16 312 aaPredicted RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 SLC2A13Q96QE2 648 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 PRRX2Q99811 253 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 CNPY3Q9BT09 278 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 DDX23Q9BUQ8 820 aaKnown RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 TKTL2Q9H0I9 626 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 IRF2BPLQ9H1B7 796 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 LINC00597Q9H2U6 94 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 TBC1D17Q9HA65 648 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 DNAJC17Q9NVM6 304 aaKnown RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 GTSE1Q9NYZ3 720 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 UVRAGQ9P2Y5 699 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms