RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ANAPC5Q9UJX4 755 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 CDY1Q9Y6F8 540 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 MRPL42Q9Y6G3 142 aaKnown RBP17.76■□□□□ 0.43
HDDC3-206ENST00000561036 PLXNA3P51805 1871 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 SYNJ2BP-COX16A0A087WUM0 186 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 BCLAF3A2AJT9 711 aaKnown RBP17.75■□□□□ 0.43
HDDC3-206ENST00000561036 IRAK2O43187 625 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 VNN2O95498 520 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 ACRP10323 421 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 HTR7P34969 479 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 TUFMP49411 452 aaKnown RBP17.75■□□□□ 0.43
HDDC3-206ENST00000561036 DHX9Q08211 1270 aaKnown RBP17.75■□□□□ 0.43
HDDC3-206ENST00000561036 SEMA3BQ13214 749 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 TRIP13Q15645 432 aaPredicted RBP17.75■□□□□ 0.43
HDDC3-206ENST00000561036 HSP90B2PQ58FF3 399 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 TPGS2Q68CL5 300 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 C1orf228Q6PIY5 440 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 LRIG3Q6UXM1 1119 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 PCGF5Q86SE9 256 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 DDX53Q86TM3 631 aaKnown RBP17.75■□□□□ 0.43
HDDC3-206ENST00000561036 CDKL3Q8IVW4 592 aaPredicted RBP17.75■□□□□ 0.43
HDDC3-206ENST00000561036 TMEM121Q9BTD3 319 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 OSBPL2Q9H1P3 480 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 CLIC5Q9NZA1 410 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 COX16Q9P0S2 106 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 MAFFQ9ULX9 164 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 RAD54BQ9Y620 910 aa17.75■□□□□ 0.43
HDDC3-206ENST00000561036 A0A1W2PQH9 124 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 H7C0C1 242 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 SMAPO00193 183 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 DNALI1O14645 258 aaPredicted RBP17.74■□□□□ 0.43
HDDC3-206ENST00000561036 TP73O15350 636 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 FGBP02675 491 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 GOT1P17174 413 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 ATP5OP48047 213 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 GLUD2P49448 558 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 ITGA8P53708 1063 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 DPYSQ14117 519 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 PPP2R5DQ14738 602 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 MGAT5BQ3V5L5 792 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 IZUMO3Q5VZ72 239 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 DARS2Q6PI48 645 aaKnown RBP17.74■□□□□ 0.43
HDDC3-206ENST00000561036 NPNTQ6UXI9 565 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 C4orf22Q6V702 233 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 PDZD4Q76G19 769 aaPredicted RBP17.74■□□□□ 0.43
HDDC3-206ENST00000561036 ADAM32Q8TC27 787 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 RTP4Q96DX8 246 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 HAPLN3Q96S86 360 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 YME1L1Q96TA2 773 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 EPAS1Q99814 870 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 PRDM10Q9NQV6 1147 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 ARHGEF4Q9NR80 690 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 OLA1Q9NTK5 396 aaKnown RBP17.74■□□□□ 0.43
HDDC3-206ENST00000561036 ARHGEF38Q9NXL2 777 aa17.74■□□□□ 0.43
HDDC3-206ENST00000561036 AFF4Q9UHB7 1163 aaKnown RBP17.74■□□□□ 0.43
HDDC3-206ENST00000561036 TPX2Q9ULW0 747 aaKnown RBP17.74■□□□□ 0.43
HDDC3-206ENST00000561036 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.73■□□□□ 0.43
HDDC3-206ENST00000561036 WDR27A2RRH5 827 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 HACD1B0YJ81 288 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 EEF2KO00418 725 aaKnown RBP17.73■□□□□ 0.43
HDDC3-206ENST00000561036 OPA1O60313 960 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 RARGP13631 454 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 AMPD1P23109 780 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 CCR1P32246 355 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 OR1D2P34982 312 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 HSD17B3P37058 310 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 GPR15P49685 360 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 HTRA4P83105 476 aaPredicted RBP17.73■□□□□ 0.43
HDDC3-206ENST00000561036 CREMQ03060 361 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 FPGSQ05932 587 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 IFRD2Q12894 506 aaPredicted RBP17.73■□□□□ 0.43
HDDC3-206ENST00000561036 GPS1Q13098 491 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 DUSP4Q13115 394 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 MORF4L2Q15014 288 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 PAFAH1B3Q15102 231 aaKnown RBP17.73■□□□□ 0.43
HDDC3-206ENST00000561036 P3H1Q32P28 736 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 SDHAF4Q5VUM1 108 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 HIBCHQ6NVY1 386 aaPredicted RBP17.73■□□□□ 0.43
HDDC3-206ENST00000561036 FAM117BQ6P1L5 589 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 RFX8Q6ZV50 586 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 PYROXD2Q8N2H3 581 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 TTC9BQ8N6N2 239 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 FBXO32Q969P5 355 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 SERPINB11Q96P15 392 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 RUFY1Q96T51 708 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 SEPT5Q99719 369 aaPredicted RBP17.73■□□□□ 0.43
HDDC3-206ENST00000561036 TTLL2Q9BWV7 592 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 MCOLN1Q9GZU1 580 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 TKTL2Q9H0I9 626 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 NMUR1Q9HB89 426 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 TLR8Q9NR97 1041 aaKnown RBP17.73■□□□□ 0.43
HDDC3-206ENST00000561036 SLC27A5Q9Y2P5 690 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 HEY1Q9Y5J3 304 aa17.73■□□□□ 0.43
HDDC3-206ENST00000561036 SPDYE4A6NLX3 237 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 ADAM12O43184 909 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 ABLIM3O94929 683 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 IFNB1P01574 187 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 URODP06132 367 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 SLC2A3P11169 496 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 VPS41P49754 854 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms