RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 ZMIZ2Q8NF64 920 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 SLC2A14Q8TDB8 520 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 FAXDC2Q96IV6 333 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 NT5C1BQ96P26 610 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 SMOQ99835 787 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 NT5C1AQ9BXI3 368 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 CYLDQ9NQC7 956 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 ANO10Q9NW15 660 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 MARK1Q9P0L2 795 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 LSM7Q9UK45 103 aaKnown RBP11.28□□□□□ -0.6
TPM1-227ENST00000560970 STARD13Q9Y3M8 1113 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 NFE2L3Q9Y4A8 694 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 NEUROG3Q9Y4Z2 214 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 DMXL2Q8TDJ6 3036 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
TPM1-227ENST00000560970 ADAMTS20P59510 1910 aa11.27□□□□□ -0.6
TPM1-227ENST00000560970 PLXNB3Q9ULL4 1909 aa11.27□□□□□ -0.6
TPM1-227ENST00000560970 GON4LQ3T8J9 2241 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 ZFYVE26Q68DK2 2539 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 IGHV1OR15-9A0A0B4J2B8 117 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 ZBTB24O43167 697 aaPredicted RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 CYP26A1O43174 497 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 ZNF217O75362 1048 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 BEST1O76090 585 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 TOP3BO95985 862 aaKnown RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 SERPINF2P08697 491 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 FAM200BP0CF97 657 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 TYRP14679 529 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 NDUFV2P19404 249 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 ACO1P21399 889 aaKnown RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 ADORA2BP29275 332 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 GFPT1Q06210 699 aaPredicted RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 SEMA3BQ13214 749 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 GSE1Q14687 1217 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 CT47A1Q5JQC4 288 aaPredicted RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 PPP1R26Q5T8A7 1209 aaPredicted RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 CDKAL1Q5VV42 579 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 GJB7Q6PEY0 223 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 TMEM25Q86YD3 366 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 MIB1Q86YT6 1006 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 CHPFQ8IZ52 775 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 EHBP1Q8NDI1 1231 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 ENOX1Q8TC92 643 aaKnown RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 WBP2Q969T9 261 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 HSPA12BQ96MM6 686 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 KREMEN1Q96MU8 473 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 XPO6Q96QU8 1125 aaKnown RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 GABRG3Q99928 467 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 CRACR2AQ9BSW2 395 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 FUCA2Q9BTY2 467 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 GTPBP2Q9BX10 602 aaKnown RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 BBS2Q9BXC9 721 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 CAPN10Q9HC96 672 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 CSNK1G1Q9HCP0 422 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 CD248Q9HCU0 757 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 PNPLA8Q9NP80 782 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 CHORDC1Q9UHD1 332 aaPredicted RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 AJAP1Q9UKB5 411 aaPredicted RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 SLC6A14Q9UN76 642 aa11.27□□□□□ -0.61
TPM1-227ENST00000560970 DSPP15924 2871 aaKnown RBP11.27□□□□□ -0.61
TPM1-227ENST00000560970 BAHCC1Q9P281 2608 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 ANKRD11Q6UB99 2663 aaPredicted RBP11.26□□□□□ -0.61
TPM1-227ENST00000560970 A0A1W2PQF6 199 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 TRIM24O15164 1050 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 HYAL3O43820 417 aaPredicted RBP11.26□□□□□ -0.61
TPM1-227ENST00000560970 OPHN1O60890 802 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 CALCAP01258 141 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 SLC9A1P19634 815 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 WASP42768 502 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 MAP3K7CLP57077 242 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 SIM1P81133 766 aaPredicted RBP11.26□□□□□ -0.61
TPM1-227ENST00000560970 ZNF33AQ06730 810 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 KCNJ12Q14500 433 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 NCAPHQ15003 741 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 MAN2A1Q16706 1144 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 ANO6Q4KMQ2 910 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 SDE2Q6IQ49 451 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 TRIM65Q6PJ69 517 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 CLEC20AQ6ZU45 233 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 HTR3DQ70Z44 454 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 RRAGAQ7L523 313 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 GPRIN1Q7Z2K8 1008 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 FAM114A1Q8IWE2 563 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 MINDY1Q8N5J2 469 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 IPO4Q8TEX9 1081 aaKnown RBP11.26□□□□□ -0.61
TPM1-227ENST00000560970 TMEM176AQ96HP8 235 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 TUBGCP2Q9BSJ2 902 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 HSD3B7Q9H2F3 369 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 FSCN3Q9NQT6 498 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 TAB2Q9NYJ8 693 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 RALYQ9UKM9 306 aaKnown RBP11.26□□□□□ -0.61
TPM1-227ENST00000560970 HCN2Q9UL51 889 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 CYP8B1Q9UNU6 501 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 SCML2Q9UQR0 700 aa11.26□□□□□ -0.61
TPM1-227ENST00000560970 SPAARA0A1B0GVQ0 90 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 HHLA1C9JL84 531 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms