RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 TOP1MTQ969P6 601 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 GCOM2Q9BZD3 368 aaPredicted RBP16.55■□□□□ 0.24
PBX1-219ENST00000560641 B3GNT3Q9Y2A9 372 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
PBX1-219ENST00000560641 NDUFB10O96000 172 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 ENTPD1P49961 510 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 PCLAFQ15004 111 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 NOMO1Q15155 1222 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 C6orf52Q5T4I8 152 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 HHIPL2Q6UWX4 724 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 SLC30A10Q6XR72 485 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 DCDC5Q6ZRR9 648 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 SETD3Q86TU7 594 aaPredicted RBP16.55■□□□□ 0.24
PBX1-219ENST00000560641 C17orf50Q8WW18 174 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 MCEEQ96PE7 176 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 UHRF1Q96T88 793 aaPredicted RBP16.55■□□□□ 0.24
PBX1-219ENST00000560641 TDRD1Q9BXT4 1180 aaKnown RBP16.55■□□□□ 0.24
PBX1-219ENST00000560641 HIPK3Q9H422 1215 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 PCDHGC3Q9UN70 934 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 FBP2O00757 339 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 HLA-DRAP01903 254 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 QARSP47897 775 aaKnown RBP16.54■□□□□ 0.24
PBX1-219ENST00000560641 ZBED5Q49AG3 693 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 NIPAL1Q6NVV3 410 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 IYDQ6PHW0 289 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 MIER3Q7Z3K6 550 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 CERKQ8TCT0 537 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 ANKRD60Q9BZ19 345 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 SLC38A7Q9NVC3 462 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 SPATA7Q9P0W8 599 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 PAK5Q9P286 719 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 SLC8A2Q9UPR5 921 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 TDRKHQ9Y2W6 561 aaKnown RBP16.54■□□□□ 0.24
PBX1-219ENST00000560641 FAM32AQ9Y421 112 aaKnown RBP16.54■□□□□ 0.24
PBX1-219ENST00000560641 STYXL1Q9Y6J8 313 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 PLIN3O60664 434 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 VNN1O95497 513 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 CSH1P0DML2 217 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 CSH2P0DML3 217 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 PEX3P56589 373 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 BASP1P80723 227 aaKnown RBP16.54■□□□□ 0.24
PBX1-219ENST00000560641 VPS72Q15906 364 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 C16orf46Q6P387 395 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 CNDP2Q96KP4 475 aaKnown RBP16.54■□□□□ 0.24
PBX1-219ENST00000560641 ZNF385DQ9H6B1 395 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 PRDM16Q9HAZ2 1276 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 OLAHQ9NV23 265 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 IPO11Q9UI26 975 aaKnown RBP16.54■□□□□ 0.24
PBX1-219ENST00000560641 GGA1Q9UJY5 639 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 MYRFQ9Y2G1 1151 aa16.54■□□□□ 0.24
PBX1-219ENST00000560641 ACOT8O14734 319 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 MCF2LO15068 1137 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 ALDH1A2O94788 518 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 BCAP31P51572 246 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 EIF3EP60228 445 aaKnown RBP16.53■□□□□ 0.24
PBX1-219ENST00000560641 NAB1Q13506 487 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 ACAP1Q15027 740 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 CAND1Q86VP6 1230 aaKnown RBP16.53■□□□□ 0.24
PBX1-219ENST00000560641 GSDMBQ8TAX9 411 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 PPP4R1Q8TF05 950 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 ZC3H7BQ9UGR2 993 aaKnown RBP16.53■□□□□ 0.24
PBX1-219ENST00000560641 DCDC2Q9UHG0 476 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 AGTPBP1Q9UPW5 1226 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 PSME4Q14997 1843 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 SLC15A5A6NIM6 579 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 EXTL3O43909 919 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 PRKCGP05129 697 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 STT3AP46977 705 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 STAT2P52630 851 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 RPS3AP61247 264 aaKnown RBP16.53■□□□□ 0.24
PBX1-219ENST00000560641 NAA20P61599 178 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 MTMR2Q13614 643 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
PBX1-219ENST00000560641 STEAP4Q687X5 459 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 PGAM4Q8N0Y7 254 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 ARFGAP1Q8N6T3 406 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 FAM71DQ8N9W8 422 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 ZNF606Q8WXB4 792 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 PKP2Q99959 881 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 NEURL2Q9BR09 285 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 SLC13A1Q9BZW2 595 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 CYP4F11Q9HBI6 524 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 HACD3Q9P035 362 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 GNPTGQ9UJJ9 305 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 PRR12Q9ULL5 1215 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 COQ6Q9Y2Z9 468 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 COL2A1P02458 1487 aaPredicted RBP16.53■□□□□ 0.24
PBX1-219ENST00000560641 TTKP33981 857 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 NPTX2P47972 431 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 PAOXQ6QHF9 649 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 ATG14Q6ZNE5 492 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 PHTF2Q8N3S3 785 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 RP9Q8TA86 221 aaKnown RBP16.53■□□□□ 0.24
PBX1-219ENST00000560641 HSPH1Q92598 858 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 ISOC1Q96CN7 298 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 APOBEC3GQ9HC16 384 aaKnown RBP16.53■□□□□ 0.24
PBX1-219ENST00000560641 MOCS1Q9NZB8 636 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 ZNF711Q9Y462 761 aa16.53■□□□□ 0.24
PBX1-219ENST00000560641 PCDHB12Q9Y5F1 795 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms