RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	GOLGA6D	P0CG33	693 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	PTDSS1	P48651	473 aa	Known RBP	4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	POLD2	P49005	469 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	GPC5	P78333	572 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	STK3	Q13188	491 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	SRGAP1	Q7Z6B7	1085 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	C14orf80	Q86SX3	495 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	RBM23	Q86U06	439 aa	Known RBP	4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	MICU3	Q86XE3	530 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	FAM71D	Q8N9W8	422 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	SUCLG2	Q96I99	432 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	NUAK2	Q9H093	628 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	MLXIPL	Q9NP71	852 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	CD93	Q9NPY3	652 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	TRIM36	Q9NQ86	728 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	ARL8B	Q9NVJ2	186 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	OBP2A	Q9NY56	170 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	GOLGA6A	Q9NYA3	693 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	RGS17	Q9UGC6	210 aa	Predicted RBP	4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	FZD4	Q9ULV1	537 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	ISM1	B1AKI9	464 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	RRH	O14718	337 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	CA12	O43570	354 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	TLX3	O43711	291 aa	Predicted RBP	4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	RRP9	O43818	475 aa	Known RBP	4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	SOCS5	O75159	536 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	PIAS2	O75928	621 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	ACAA1	P09110	424 aa	Predicted RBP	4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	CD19	P15391	556 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	ADRA1D	P25100	572 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	SLC7A1	P30825	629 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	MLH1	P40692	756 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	CACNB3	P54284	484 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	RNF220	Q5VTB9	566 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	PNPLA1	Q8N8W4	532 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	FAM156A	Q8NDB6	213 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	LMO3	Q8TAP4	145 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	NMD3	Q96D46	503 aa	Known RBP	4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	SF3B5	Q9BWJ5	86 aa	Known RBP	4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	STK31	Q9BXU1	1019 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	ANAPC4	Q9UJX5	808 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	PAXBP1	Q9Y5B6	917 aa		4.16	□□□□□ -1.74
SLTM-223	ENST00000560532	CFAP69	A5D8W1	941 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	TRIM43B	A6NCK2	446 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	PYCARD-AS1	I3L0S3	204 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	SPTLC2	O15270	562 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	PPM1G	O15355	546 aa	Predicted RBP	4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	PRAMEF2	O60811	474 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	MYF5	P13349	255 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	TBXAS1	P24557	533 aa	Predicted RBP	4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	NTSR1	P30989	418 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	SUMO3	P55854	103 aa	Predicted RBP	4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	ARHGEF7	Q14155	803 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	POLD3	Q15054	466 aa	Predicted RBP	4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	SLC39A5	Q6ZMH5	540 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	FMNL3	Q8IVF7	1028 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	SLC44A5	Q8NCS7	719 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	LRTOMT	Q8WZ04	291 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	APIP	Q96GX9	242 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	VPS50	Q96JG6	964 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	FCRL5	Q96RD9	977 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	PRDM11	Q9NQV5	511 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	SACM1L	Q9NTJ5	587 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	CPNE7	Q9UBL6	633 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	HDAC9	Q9UKV0	1011 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	RIMKLB	Q9ULI2	386 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	TPCN1	Q9ULQ1	816 aa		4.15	□□□□□ -1.75
SLTM-223	ENST00000560532	SLC22A23	A1A5C7	686 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	MBD3L3	A6NE82	208 aa	Predicted RBP	4.14	□□□□□ -1.75
SLTM-223	ENST00000560532		A8MVJ9	347 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532		F8W810	466 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532		H0YGN5	161 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	RAB27B	O00194	218 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	GOLIM4	O00461	696 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	CCP110	O43303	1012 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	PARN	O95453	639 aa	Known RBP	4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	TCEA1	P23193	301 aa	Known RBP	4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	COMP	P49747	757 aa	Predicted RBP	4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	FAM193A	P78312	1265 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	TXNL4A	P83876	142 aa	Known RBP	4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	SEMA5A	Q13591	1074 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	CNGA2	Q16280	664 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	CLEC9A	Q6UXN8	241 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	USP49	Q70CQ1	688 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	TFAP2D	Q7Z6R9	452 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	PIGK	Q92643	395 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	AGO4	Q9HCK5	861 aa	Known RBP	4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	COL20A1	Q9P218	1284 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	STEAP1	Q9UHE8	339 aa		4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.14	□□□□□ -1.75
SLTM-223	ENST00000560532	MARCH6	O60337	910 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	BRAF	P15056	766 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	ATF3	P18847	181 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	YY1	P25490	414 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	HOXA7	P31268	230 aa	Predicted RBP	4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	GALNS	P34059	522 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	JAK3	P52333	1124 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	FMO1	Q01740	532 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms