RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 IL37Q9NZH6 218 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 USP36Q9P275 1121 aaKnown RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 TFIP11Q9UBB9 837 aaKnown RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 SCML2Q9UQR0 700 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 FAM92AA1XBS5 289 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 LRRIQ3A6PVS8 624 aaPredicted RBP11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 NPC1O15118 1278 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 STX6O43752 255 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 STC2O76061 302 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 CAPNS1P04632 268 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 CISD3P0C7P0 127 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 SYT1P21579 422 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 CASP1P29466 404 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 CORO1AP31146 461 aaKnown RBP11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 CHKAP35790 457 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 EFEMP1Q12805 493 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 GEN1Q17RS7 908 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 SGSM1Q2NKQ1 1148 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 FNDC3BQ53EP0 1204 aaKnown RBP11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 SPOPLQ6IQ16 392 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 DDI1Q8WTU0 396 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 CYFIP2Q96F07 1278 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 DCLK3Q9C098 648 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 NMUR1Q9HB89 426 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 CD248Q9HCU0 757 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 KBTBD4Q9NVX7 518 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 OSER1Q9NX31 292 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 CGNQ9P2M7 1197 aaKnown RBP11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 ZNF510Q9Y2H8 683 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 PCDHA5Q9Y5H7 936 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 NUMA1Q14980 2115 aa11.02□□□□□ -0.65
CDC42BPB-207ENST00000560492 URB1O60287 2271 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 TRABD2BA6NFA1 517 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 METTL12A8MUP2 240 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 SPTLC2O15270 562 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 CBFA2T3O75081 653 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 FSBPO95073 299 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 ZNF883P0CG24 379 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 HLA-EP13747 358 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 CD58P19256 250 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 PRKCHP24723 683 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 AFMP43652 599 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 AFF3P51826 1226 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 ZNF132P52740 706 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 MFAP3P55082 362 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 COG7P83436 770 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 IL9RQ01113 521 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 KNOP1Q1ED39 458 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 INAVAQ3KP66 663 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 CEP135Q66GS9 1140 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 CLEC20AQ6ZU45 233 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 UNC13DQ70J99 1090 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 TMPRSS7Q7RTY8 843 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 METTL3Q86U44 580 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 UNC93AQ86WB7 457 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 DENND1CQ8IV53 801 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 GOLGA5Q8TBA6 731 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 PIP4K2CQ8TBX8 421 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 PLEKHO2Q8TD55 490 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 GANCQ8TET4 914 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 PARD3BQ8TEW8 1205 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 SORCS1Q8WY21 1168 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 CDK5RAP1Q96SZ6 601 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 LHX5Q9H2C1 402 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 MMRN2Q9H8L6 949 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 VRTNQ9H8Y1 702 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 CSNK1G1Q9HCP0 422 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 ELOVL2Q9NXB9 296 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 KIAA1522Q9P206 1035 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 THAP10Q9P2Z0 257 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 STRIP2Q9ULQ0 834 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 BTBD3Q9Y2F9 522 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 NFE2L3Q9Y4A8 694 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 SNX11Q9Y5W9 270 aa11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 GCN1Q92616 2671 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-207ENST00000560492 PLXNA2O75051 1894 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 IGSF10Q6WRI0 2623 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 APC2O95996 2303 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 SLC12A8A0AV02 714 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 KCNK3O14649 394 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 POLR2DO15514 142 aaKnown RBP11□□□□□ -0.65
CDC42BPB-207ENST00000560492 GREM1O60565 184 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 VNN1O95497 513 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 C4BPAP04003 597 aaKnown RBP11□□□□□ -0.65
CDC42BPB-207ENST00000560492 ABCG1P45844 678 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 CCT8P50990 548 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 E2F4Q16254 413 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 BMT2Q1RMZ1 405 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 FOXD4L6Q3SYB3 417 aaPredicted RBP11□□□□□ -0.65
CDC42BPB-207ENST00000560492 FYB2Q5VWT5 728 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 DHRS13Q6UX07 377 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 LAYNQ6UX15 382 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 FOXD4L3Q6VB84 417 aaPredicted RBP11□□□□□ -0.65
CDC42BPB-207ENST00000560492 Q6ZNB5 142 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 CRYBG2Q8N1P7 616 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 ZNF366Q8N895 744 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 CCDC150Q8NCX0 1101 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms