RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 PRRX2Q99811 253 aa14.58□□□□□ -0.08
PKNOX1-209ENST00000560448 DDX50Q9BQ39 737 aaKnown RBP14.58□□□□□ -0.08
PKNOX1-209ENST00000560448 TBC1D17Q9HA65 648 aa14.58□□□□□ -0.08
PKNOX1-209ENST00000560448 C11orf16Q9NQ32 467 aa14.58□□□□□ -0.08
PKNOX1-209ENST00000560448 ADAM22Q9P0K1 906 aa14.58□□□□□ -0.08
PKNOX1-209ENST00000560448 MARK1Q9P0L2 795 aa14.58□□□□□ -0.08
PKNOX1-209ENST00000560448 NUDT5Q9UKK9 219 aa14.58□□□□□ -0.08
PKNOX1-209ENST00000560448 WNT6Q9Y6F9 365 aa14.58□□□□□ -0.08
PKNOX1-209ENST00000560448 USP27XA6NNY8 438 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 IRAK2O43187 625 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 HOXC11O43248 304 aaPredicted RBP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 NRDCO43847 1150 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 MFAP3LO75121 409 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 IGLV3-25P01717 112 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 DESP17661 470 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 AOC1P19801 751 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 CORO1AP31146 461 aaKnown RBP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 SLC11A2P49281 568 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 TBX4P57082 545 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 EIF4EBP2Q13542 120 aaPredicted RBP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 DHCR24Q15392 516 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 TDRD12Q587J7 1177 aaKnown RBP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 DCAF6Q58WW2 860 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 FAM102AQ5T9C2 384 aaPredicted RBP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 NUDT18Q6ZVK8 323 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 FAM217AQ8IXS0 508 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 SYNPOQ8N3V7 929 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 ZNF557Q8N988 423 aaPredicted RBP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 C3orf20Q8ND61 904 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 DNAJC7Q99615 494 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 BAG1Q99933 345 aaPredicted RBP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 LTB4R2Q9NPC1 389 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 TJP2Q9UDY2 1190 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 SFMBT1Q9UHJ3 866 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 SLC12A6Q9UHW9 1150 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 NAALADL1Q9UQQ1 740 aa14.57□□□□□ -0.08
PKNOX1-209ENST00000560448 SSU72P8A0A1W2PR75 194 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 ANKRD62A6NC57 917 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 TRDMT1O14717 391 aaKnown RBP14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 MDM4O15151 490 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 ARHGAP6O43182 974 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 TRUB2O95900 331 aaKnown RBP14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 APOEP02649 317 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 CYBBP04839 570 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 MYBL1P10243 752 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 IRF1P10914 325 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 GJA4P35212 333 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 RPS9P46781 194 aaKnown RBP14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 TNK2Q07912 1038 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 LRRC32Q14392 662 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 SLC25A52Q3SY17 297 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 FBXO43Q4G163 708 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 DGKKQ5KSL6 1271 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 HGSNATQ68CP4 663 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 TRIM68Q6AZZ1 485 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 MMS22LQ6ZRQ5 1243 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 MON1BQ7L1V2 547 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 BBS7Q8IWZ6 715 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 DEFB106AQ8N104 65 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 TTC16Q8NEE8 873 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 PJA1Q8NG27 643 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 CPLX3Q8WVH0 158 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 NT5C3BQ969T7 300 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 SLC39A13Q96H72 371 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 PCDHB18PQ96TA0 734 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 C11orf70Q9BRQ4 267 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 KCNH6Q9H252 994 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 LINC00597Q9H2U6 94 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 SPHK2Q9NRA0 654 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 SIT1Q9Y3P8 196 aa14.56□□□□□ -0.08
PKNOX1-209ENST00000560448 STK25O00506 426 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 RTN2O75298 545 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 CYP17A1P05093 508 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 ADH5P11766 374 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 ARSAP15289 507 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 DRD1P21728 446 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 CCR1P32246 355 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 GRSF1Q12849 480 aaKnown RBP eCLIP14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 PTP4A2Q12974 167 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 PPP2R5DQ14738 602 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 BRMS1LQ5PSV4 323 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 MPP7Q5T2T1 576 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 ADGRF1Q5T601 910 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 SYPL2Q5VXT5 272 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 NYAP1Q6ZVC0 841 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 SND1Q7KZF4 910 aaKnown RBP eCLIP14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 ZNF571Q7Z3V5 609 aaPredicted RBP14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 SLC30A5Q8TAD4 765 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 PIWIL1Q96J94 861 aaKnown RBP14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 BTN2A3PQ96KV6 586 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 XPO6Q96QU8 1125 aaKnown RBP14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 NPY6RQ99463 290 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 ABHD10Q9NUJ1 306 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 TMEM59LQ9UK28 342 aa14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 AGO1Q9UL18 857 aaKnown RBP14.55□□□□□ -0.08
PKNOX1-209ENST00000560448 SIGLEC16A6NMB1 481 aa14.54□□□□□ -0.08
PKNOX1-209ENST00000560448 KLKB1P03952 638 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms