RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 DENND1CQ8IV53 801 aa3.3□□□□□ -1.88
SPG11-222ENST00000560435 CLEC18CQ8NCF0 446 aa3.3□□□□□ -1.88
SPG11-222ENST00000560435 HES6Q96HZ4 224 aa3.3□□□□□ -1.88
SPG11-222ENST00000560435 RNF26Q9BY78 433 aaPredicted RBP3.3□□□□□ -1.88
SPG11-222ENST00000560435 INSL5Q9Y5Q6 135 aa3.3□□□□□ -1.88
SPG11-222ENST00000560435 WASHC2CQ9Y4E1 1318 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 A6NNC1 897 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 IFNA2P01563 188 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 CHRNB1P11230 501 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 HTR1BP28222 390 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 SOX2P48431 317 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 AGFG1P52594 562 aaKnown RBP3.29□□□□□ -1.88
SPG11-222ENST00000560435 SHBQ15464 509 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 ANO6Q4KMQ2 910 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 EGFLAMQ63HQ2 1017 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 DAAM2Q86T65 1068 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 MICU3Q86XE3 530 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 PRPF38AQ8NAV1 312 aaKnown RBP3.29□□□□□ -1.88
SPG11-222ENST00000560435 NT5C1BQ96P26 610 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 SENP7Q9BQF6 1050 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 ZCWPW1Q9H0M4 648 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 CDCP1Q9H5V8 836 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 ZMAT3Q9HA38 289 aaKnown RBP3.29□□□□□ -1.88
SPG11-222ENST00000560435 SAP30LQ9HAJ7 183 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 SLC27A6Q9Y2P4 619 aa3.29□□□□□ -1.88
SPG11-222ENST00000560435 LUC7L2Q9Y383 392 aaKnown RBP3.29□□□□□ -1.88
SPG11-222ENST00000560435 AQP7P3A6NL99 342 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 FAM227AF5H4B4 570 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 PYCARD-AS1I3L0S3 204 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 SNX2O60749 519 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 OFD1O75665 1012 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 TMEM225BP0DP42 221 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 RBL1P28749 1068 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 VPS41P49754 854 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 COPAP53621 1224 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 RAE1P78406 368 aaKnown RBP3.28□□□□□ -1.88
SPG11-222ENST00000560435 ROR2Q01974 943 aaKnown RBP3.28□□□□□ -1.88
SPG11-222ENST00000560435 CRYZQ08257 329 aaKnown RBP3.28□□□□□ -1.88
SPG11-222ENST00000560435 STK3Q13188 491 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 MRGPRG-AS1Q2M3A8 158 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 ASPHD1Q5U4P2 390 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 GRHL2Q6ISB3 625 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 CLEC9AQ6UXN8 241 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 DIS3LQ8TF46 1054 aaKnown RBP3.28□□□□□ -1.88
SPG11-222ENST00000560435 TMEM174Q8WUU8 243 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 KAT2BQ92831 832 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 INPP5DQ92835 1189 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 CELF1Q92879 486 aaKnown RBP3.28□□□□□ -1.88
SPG11-222ENST00000560435 WBP2Q969T9 261 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 EME1Q96AY2 570 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 ZDHHC12Q96GR4 267 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 PRR11Q96HE9 360 aaPredicted RBP3.28□□□□□ -1.88
SPG11-222ENST00000560435 HIST1H2AAQ96QV6 131 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 HTATIP2Q9BUP3 242 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 TTLL2Q9BWV7 592 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 SLC12A5Q9H2X9 1139 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 FAM83DQ9H4H8 585 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 TASP1Q9H6P5 420 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 TCF7L1Q9HCS4 588 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 GABBR1Q9UBS5 961 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 VPS51Q9UID3 782 aa3.28□□□□□ -1.88
SPG11-222ENST00000560435 COL15A1P39059 1388 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 TRIM43BA6NCK2 446 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 SMTNL1A8MU46 457 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 BTBD18B2RXH4 712 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 H3BML4 177 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 RASSF9O75901 435 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 NCLP19338 710 aaKnown RBP3.27□□□□□ -1.89
SPG11-222ENST00000560435 NTSR1P30989 418 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 PGM5Q15124 567 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 FAM76BQ5HYJ3 339 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 PRAMEF19Q5SWL8 479 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 ISM2Q6H9L7 571 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 PRSS57Q6UWY2 283 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 P3H2Q8IVL5 708 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 PRR26Q8N8Z3 221 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 SMCR8Q8TEV9 937 aaPredicted RBP3.27□□□□□ -1.89
SPG11-222ENST00000560435 CENPIQ92674 756 aaPredicted RBP3.27□□□□□ -1.89
SPG11-222ENST00000560435 TRIM43Q96BQ3 446 aaPredicted RBP3.27□□□□□ -1.89
SPG11-222ENST00000560435 SUCLG2Q96I99 432 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 DCLK3Q9C098 648 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 CDT1Q9H211 546 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 SIRT3Q9NTG7 399 aaPredicted RBP3.27□□□□□ -1.89
SPG11-222ENST00000560435 ABHD10Q9NUJ1 306 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 ASNSD1Q9NWL6 643 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 DNAJB11Q9UBS4 358 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 RGS17Q9UGC6 210 aaPredicted RBP3.27□□□□□ -1.89
SPG11-222ENST00000560435 IPO11Q9UI26 975 aaKnown RBP3.27□□□□□ -1.89
SPG11-222ENST00000560435 CKAP5Q14008 2032 aa3.27□□□□□ -1.89
SPG11-222ENST00000560435 SPATA31A5Q5VU36 1347 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 SPATA31A7Q8IWB4 1347 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 A0A0B4J293 547 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 TTC34A8MYJ7 566 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 PRYO14603 147 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 TBX3O15119 743 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 MDM4O15151 490 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 UBXN7O94888 489 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 ACVR2AP27037 513 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 DUSP1P28562 367 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 HTR7P34969 479 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms