RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 COG7P83436 770 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 RPL6Q02878 288 aaKnown RBP14.24□□□□□ -0.13
SMAD3-214ENST00000560402 ADAM9Q13443 819 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 SH3PXD2AQ5TCZ1 1133 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 TPGS1Q6ZTW0 290 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 ARMCX6Q7L4S7 300 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 ZDHHC4Q9NPG8 344 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 RWDD2AQ9UIY3 292 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 PILRBQ9UKJ0 227 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 SLC27A6Q9Y2P4 619 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 CKAP5Q14008 2032 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 ZNF500O60304 480 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-214ENST00000560402 TPM2P07951 284 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 EPB41P11171 864 aaKnown RBP14.23□□□□□ -0.13
SMAD3-214ENST00000560402 ENGP17813 658 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 CHKAP35790 457 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 ZNF132P52740 706 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 SLC8A3P57103 927 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 DUOXA1Q1HG43 343 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 PPP1R26Q5T8A7 1209 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-214ENST00000560402 ARHGAP17Q68EM7 881 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 KLHL10Q6JEL2 608 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 FBXL13Q8NEE6 735 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 IPO4Q8TEX9 1081 aaKnown RBP14.23□□□□□ -0.13
SMAD3-214ENST00000560402 UBXN6Q9BZV1 441 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 XPO4Q9C0E2 1151 aaKnown RBP14.23□□□□□ -0.13
SMAD3-214ENST00000560402 SLC32A1Q9H598 525 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 MMRN2Q9H8L6 949 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 CD248Q9HCU0 757 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 FANCLQ9NW38 375 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 HCN2Q9UL51 889 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 CTNND2Q9UQB3 1225 aa14.23□□□□□ -0.13
SMAD3-214ENST00000560402 ATXN2Q99700 1313 aaKnown RBP14.22□□□□□ -0.13
SMAD3-214ENST00000560402 ADAMTS9Q9P2N4 1935 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 IGHV1OR15-9A0A0B4J2B8 117 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 UPK3BL1B0FP48 263 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 PRRT4C9JH25 899 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 UPK3BL2E5RIL1 263 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 MDM4O15151 490 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 TRIM24O15164 1050 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 CETN3O15182 167 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 SLC16A3O15427 465 aaKnown RBP14.22□□□□□ -0.13
SMAD3-214ENST00000560402 KRT37O76014 449 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 PENKP01210 267 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-214ENST00000560402 SERPINF2P08697 491 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 NDUFV2P19404 249 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 BMP6P22004 513 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 ITPKAP23677 461 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 STARD3Q14849 445 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 SCD5Q86SK9 330 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 MIB1Q86YT6 1006 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 FAM114A1Q8IWE2 563 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 UCMAQ8WVF2 138 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 TMEM176AQ96HP8 235 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 DHTKD1Q96HY7 919 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-214ENST00000560402 CISHQ9NSE2 258 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 RAB20Q9NX57 234 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 RASAL2Q9UJF2 1139 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 FBXO10Q9UK96 956 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 STRIP2Q9ULQ0 834 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 SLC6A14Q9UN76 642 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 MAPK8IP1Q9UQF2 711 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 CACNA1EQ15878 2313 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 GON4LQ3T8J9 2241 aa14.22□□□□□ -0.13
SMAD3-214ENST00000560402 FGFR1OPO95684 399 aaKnown RBP14.21□□□□□ -0.13
SMAD3-214ENST00000560402 CYBBP04839 570 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 CFIP05156 583 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 CISD3P0C7P0 127 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 WASP42768 502 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 ATXN3P54252 364 aaPredicted RBP14.21□□□□□ -0.13
SMAD3-214ENST00000560402 BCAT1P54687 386 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 YWHAEP62258 255 aaKnown RBP14.21□□□□□ -0.13
SMAD3-214ENST00000560402 ZNF33AQ06730 810 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 EIF4HQ15056 248 aaKnown RBP14.21□□□□□ -0.13
SMAD3-214ENST00000560402 UAP1L1Q3KQV9 507 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 ZNF394Q53GI3 561 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 COBLL1Q53SF7 1204 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 RAB41Q5JT25 222 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 TOGARAM2Q6ZUX3 1019 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 METTL3Q86U44 580 aaKnown RBP14.21□□□□□ -0.13
SMAD3-214ENST00000560402 CPXM2Q8N436 756 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 HDDC3Q8N4P3 179 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 FRMD1Q8N878 549 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 NELFBQ8WX92 580 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 FOXJ1Q92949 421 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 PLD4Q96BZ4 506 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 HEXIM2Q96MH2 286 aaKnown RBP14.21□□□□□ -0.13
SMAD3-214ENST00000560402 CAPN10Q9HC96 672 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 OLA1Q9NTK5 396 aaKnown RBP14.21□□□□□ -0.13
SMAD3-214ENST00000560402 TMEM74BQ9NUR3 256 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 SUSD2Q9UGT4 822 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 NUDT5Q9UKK9 219 aa14.21□□□□□ -0.13
SMAD3-214ENST00000560402 PPP1R3GB7ZBB8 358 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 GIPC1O14908 333 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 PROS1P07225 676 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 TPM1P09493 284 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 CORO1AP31146 461 aaKnown RBP14.2□□□□□ -0.14
SMAD3-214ENST00000560402 MAPK8P45983 427 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 GFPT1Q06210 699 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-214ENST00000560402 FOXC1Q12948 553 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms