RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 DCHS1Q96JQ0 3298 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 AXIN1O15169 862 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 EPHB6O15197 1021 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 TSPAN3O60637 253 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 APBB3O95704 486 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 IGLV3-27P01718 113 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 NCAM1P13591 858 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 UCHL3P15374 230 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 WASP42768 502 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 PITX1P78337 314 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 MYL5Q02045 173 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 PTK2Q05397 1052 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 TYRO3Q06418 890 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 CRY1Q16526 586 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 EGFLAMQ63HQ2 1017 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 ANO7Q6IWH7 933 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 FAM217AQ8IXS0 508 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 KIAA2013Q8IYS2 634 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 CAMKK1Q8N5S9 505 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 C1orf131Q8NDD1 294 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 ADAM32Q8TC27 787 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 DQX1Q8TE96 717 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 FAM149B1Q96BN6 582 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 ERLEC1Q96DZ1 483 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 XPO6Q96QU8 1125 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 ACOX2Q99424 681 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 GANQ9H2C0 597 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 NCDNQ9UBB6 729 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 FBXO10Q9UK96 956 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 PCDHGC3Q9UN70 934 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 INVSQ9Y283 1065 aa12.15□□□□□ -0.46
RABGGTA-216ENST00000560243 GOLGA6L7A0A1B0GV03 622 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 GFRA2O00451 464 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 DCLK1O15075 740 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 RPP40O75818 363 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 ZNF18P17022 549 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 CNR2P34972 360 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 CHKAP35790 457 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 ACADSBP45954 432 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 HARS2P49590 506 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 DGKGP49619 791 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 SGSHP51688 502 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 COPB1P53618 953 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 GEN1Q17RS7 908 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 CAVIN1Q6NZI2 390 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 CEP68Q76N32 757 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 TAC4Q86UU9 113 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 KBTBD6Q86V97 674 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 CPXM2Q8N436 756 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 FAM160A2Q8N612 972 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 ZNF513Q8N8E2 541 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 TSTD1Q8NFU3 115 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 CCDC26Q8TAB7 109 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 GAB3Q8WWW8 586 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 GOLGA1Q92805 767 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 MYEOVQ96EZ4 313 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 PPP1R13BQ96KQ4 1090 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 FCRL2Q96LA5 508 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 TPSD1Q9BZJ3 242 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 PARD6AQ9NPB6 346 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 EBF1Q9UH73 591 aa12.14□□□□□ -0.47
RABGGTA-216ENST00000560243 RALGAPA1Q6GYQ0 2036 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 GON4LQ3T8J9 2241 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 CCDC163A0A0D9SF12 145 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 F8VZ95 297 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 ERBB2P04626 1255 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 CYP11B1P15538 503 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 TGM1P22735 817 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 HOXD9P28356 352 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 SLC6A4P31645 630 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 KRT9P35527 623 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 DGKEP52429 567 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 TBX4P57082 545 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 YWHAZP63104 245 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 PTPN20Q4JDL3 420 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 ANO6Q4KMQ2 910 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 FAM133BQ5BKY9 247 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 ADGRF1Q5T601 910 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 TAF3Q5VWG9 929 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 NADSYN1Q6IA69 706 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 RFWD3Q6PCD5 774 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 FAM183BPQ6ZVS7 135 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 NOP9Q86U38 636 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 RASSF3Q86WH2 238 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 AOPEPQ8N6M6 819 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 MDGA1Q8NFP4 955 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 DDI1Q8WTU0 396 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 DDX1Q92499 740 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 LHX5Q9H2C1 402 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 FAM207AQ9NSI2 230 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 LIMA1Q9UHB6 759 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 XPO7Q9UIA9 1087 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 STOML2Q9UJZ1 356 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 RAB23Q9ULC3 237 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 SIK3Q9Y2K2 1263 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 STARD13Q9Y3M8 1113 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 LAMA1P25391 3075 aa12.13□□□□□ -0.47
RABGGTA-216ENST00000560243 A0A1W2PQF6 199 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms