RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CYP11B1P15538 503 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 USP8P40818 1118 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 GABRB2P47870 512 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 HARS2P49590 506 aaKnown RBP13.78□□□□□ -0.2
SMAD3-213ENST00000560175 JAM2P57087 298 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 YWHAZP63104 245 aaKnown RBP13.78□□□□□ -0.2
SMAD3-213ENST00000560175 CRY1Q16526 586 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 C2orf27AQ580R0 203 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 ADGRF1Q5T601 910 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 EMC10Q5UCC4 262 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 SYPL2Q5VXT5 272 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 NUDT18Q6ZVK8 323 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 RASSF3Q86WH2 238 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 PIWIL1Q96J94 861 aaKnown RBP13.78□□□□□ -0.2
SMAD3-213ENST00000560175 PPP1R13BQ96KQ4 1090 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 CPXM1Q96SM3 734 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 TRIM62Q9BVG3 475 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 SLC2A11Q9BYW1 496 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 MIS12Q9H081 205 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 CD248Q9HCU0 757 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 ST7Q9NRC1 585 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 TJP2Q9UDY2 1190 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 NAALADL1Q9UQQ1 740 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 TBC1D3BA6NDS4 549 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 LGALS16A8MUM7 142 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 PRRT4C9JH25 899 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 F8VZ95 297 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 ADAM23O75077 832 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 NCAM1P13591 858 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 HNRNPLP14866 589 aaKnown RBP eCLIP13.77□□□□□ -0.216e-9■■□□□ 12.3
SMAD3-213ENST00000560175 KRT9P35527 623 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 MPP7Q5T2T1 576 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 NUGGCQ68CJ6 796 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 GRAMD4Q6IC98 578 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 TMEM92Q6UXU6 159 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 KIAA0907Q7Z7F0 614 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-213ENST00000560175 UNC45BQ8IWX7 931 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 ZNF397Q8NF99 534 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-213ENST00000560175 DQX1Q8TE96 717 aaKnown RBP13.77□□□□□ -0.21
SMAD3-213ENST00000560175 RUBCNQ92622 972 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 GOLGA1Q92805 767 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 FCRL2Q96LA5 508 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-213ENST00000560175 SLC2A13Q96QE2 648 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 LSM14BQ9BX40 385 aaKnown RBP13.77□□□□□ -0.21
SMAD3-213ENST00000560175 POPDC2Q9HBU9 364 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 DNAJC17Q9NVM6 304 aaKnown RBP13.77□□□□□ -0.21
SMAD3-213ENST00000560175 TLR6Q9Y2C9 796 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 PLXND1Q9Y4D7 1925 aa13.77□□□□□ -0.21
SMAD3-213ENST00000560175 SGK1O00141 431 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 EPHB6O15197 1021 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 MSI1O43347 362 aaKnown RBP13.76□□□□□ -0.21
SMAD3-213ENST00000560175 APBB3O95704 486 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 TGM1P22735 817 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 DGKGP49619 791 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 KLK7P49862 253 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 DGKEP52429 567 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 TBX4P57082 545 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 KDSRQ06136 332 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 ENPP2Q13822 863 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 RAPGEF1Q13905 1077 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 PTPN20Q4JDL3 420 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 ANO6Q4KMQ2 910 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 MPPE1Q53F39 396 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 FAM133BQ5BKY9 247 aaKnown RBP13.76□□□□□ -0.21
SMAD3-213ENST00000560175 EFHC1Q5JVL4 640 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 FKBP15Q5T1M5 1219 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 CAVIN1Q6NZI2 390 aaKnown RBP13.76□□□□□ -0.21
SMAD3-213ENST00000560175 TOGARAM2Q6ZUX3 1019 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 ZNF677Q86XU0 584 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 ZDHHC17Q8IUH5 632 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
SMAD3-213ENST00000560175 ALLCQ8N6M5 410 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 TXNDC5Q8NBS9 432 aaKnown RBP13.76□□□□□ -0.21
SMAD3-213ENST00000560175 EPS8L1Q8TE68 723 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 GAB3Q8WWW8 586 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 ZC3H10Q96K80 434 aaKnown RBP13.76□□□□□ -0.21
SMAD3-213ENST00000560175 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
SMAD3-213ENST00000560175 PLK2Q9NYY3 685 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 CLEC4EQ9ULY5 219 aa13.76□□□□□ -0.21
SMAD3-213ENST00000560175 SMG5Q9UPR3 1016 aaKnown RBP13.76□□□□□ -0.21
SMAD3-213ENST00000560175 ABCA7Q8IZY2 2146 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 RALGAPA1Q6GYQ0 2036 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 PES1O00541 588 aaKnown RBP13.75□□□□□ -0.21
SMAD3-213ENST00000560175 AXIN1O15169 862 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 IRAK2O43187 625 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 ACSL4O60488 711 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 ERBB2P04626 1255 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 CYBBP04839 570 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 TPM2P07951 284 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 C7P10643 843 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 ATP1A3P13637 1013 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 HOXD9P28356 352 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-213ENST00000560175 TIE1P35590 1138 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 SCNN1AP37088 669 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 SEC13P55735 322 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 SNX16P57768 344 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 POLR2FP61218 127 aaKnown RBP13.75□□□□□ -0.21
SMAD3-213ENST00000560175 IQCB1Q15051 598 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms