RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ELOVL2Q9NXB9 296 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 HSPBP1Q9NZL4 362 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 NXF1Q9UBU9 619 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 NUDT5Q9UKK9 219 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 CLEC4EQ9ULY5 219 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 TEX15Q9BXT5 2789 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 A0A1B0GTQ1 180 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 ERVH48-1M5A8F1 160 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 TSPAN3O60637 253 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 RFPL3O75679 317 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 STC2O76061 302 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 SEMA4FO95754 770 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 STAU1O95793 577 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 KLKB1P03952 638 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 EPHX1P07099 455 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 DLATP10515 647 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 C7P10643 843 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 IDEP14735 1019 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 TNNI1P19237 187 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 CD27P26842 260 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 MYL6P60660 151 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 CXADRP78310 365 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 PRAMEF14Q5SWL7 426 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 HES3Q5TGS1 186 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 TMEM215Q68D42 235 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 FBXL19Q6PCT2 694 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 GATAD2AQ86YP4 633 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 SPACA3Q8IXA5 215 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 CNDP2Q96KP4 475 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 LHX5Q9H2C1 402 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 UPF2Q9HAU5 1272 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 NMUR1Q9HB89 426 aa13.48□□□□□ -0.25
RABGGTA-213ENST00000560127 UNC79Q9P2D8 2635 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 PYCARD-AS1I3L0S3 204 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 CYP26A1O43174 497 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 DFNA5O60443 496 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 BRINP1O60477 761 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 FSBPO95073 299 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 LDOC1O95751 146 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 C1SP09871 688 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 CDK4P11802 303 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 HOXD13P35453 343 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 PLA2G4AP47712 749 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 ACADVLP49748 655 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 CCDC173Q0VFZ6 552 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 CAMK2GQ13555 558 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 SHBQ15464 509 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 KIF26BQ2KJY2 2108 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 KLHDC10Q6PID8 442 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 SERPINA13PQ6UXR4 307 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 SV2BQ7L1I2 683 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 GPRIN1Q7Z2K8 1008 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 ANKS1BQ7Z6G8 1248 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 ERICH1Q86X53 443 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 RDH13Q8NBN7 331 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 ZNF516Q92618 1163 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 TMEM176AQ96HP8 235 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 CGRRF1Q99675 332 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 SEMA4CQ9C0C4 833 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 CLMPQ9H6B4 373 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 CSNK1G1Q9HCP0 422 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 SCML2Q9UQR0 700 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 KIF3AQ9Y496 699 aa13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 USP9XQ93008 2570 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-213ENST00000560127 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 LRRK2Q5S007 2527 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 A0A1W2PQH9 124 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 H3BQV1 296 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 ARHGAP6O43182 974 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 BMP15O95972 392 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 RARGP13631 454 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 CCDC130P13994 396 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 MAP3K7CLP57077 242 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 PSMD6Q15008 389 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 EIF4HQ15056 248 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 SNRNP35Q16560 246 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 TAF1BQ53T94 588 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 ADAT2Q7Z6V5 191 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 ACOT1Q86TX2 421 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 FMNL3Q8IVF7 1028 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 TSC1Q92574 1164 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 CCDC127Q96BQ5 260 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 TNIP3Q96KP6 325 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 CIPCQ9C0C6 399 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 BTBD1Q9H0C5 482 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 GZF1Q9H116 711 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 SDCBP2Q9H190 292 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 KIAA1586Q9HCI6 787 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 PANK4Q9NVE7 773 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 CCDC39Q9UFE4 941 aa13.46□□□□□ -0.25
RABGGTA-213ENST00000560127 BSNQ9UPA5 3926 aa13.45□□□□□ -0.26
RABGGTA-213ENST00000560127 SPTAN1Q13813 2472 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-213ENST00000560127 HHLA1C9JL84 531 aa13.45□□□□□ -0.26
RABGGTA-213ENST00000560127 VILLO15195 856 aa13.45□□□□□ -0.26
RABGGTA-213ENST00000560127 IGHV4-34P06331 123 aa13.45□□□□□ -0.26
RABGGTA-213ENST00000560127 ATICP31939 592 aa13.45□□□□□ -0.26
RABGGTA-213ENST00000560127 CYP24A1Q07973 514 aa13.45□□□□□ -0.26
RABGGTA-213ENST00000560127 KCNH2Q12809 1159 aa13.45□□□□□ -0.26
RABGGTA-213ENST00000560127 TRPC3Q13507 836 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms