RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ANKRD52Q8NB46 1076 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 MCUQ8NE86 351 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 GSDMBQ8TAX9 411 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 DEPDC1BQ8WUY9 529 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 TMEM40Q8WWA1 233 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 CENPIQ92674 756 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 OXNAD1Q96HP4 312 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 TRIM6Q9C030 488 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 RNPEPL1Q9HAU8 725 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 SAR1AQ9NR31 198 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 IL1RAPL1Q9NZN1 696 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 ZNF180Q9UJW8 692 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 PCDHA11Q9Y5I1 949 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 FAM159BA6NKW6 160 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 EIF4E1BA6NMX2 242 aaKnown RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 CLDN5O00501 218 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 FCHO1O14526 889 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 TRDMT1O14717 391 aaKnown RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 CCNFP41002 786 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 SULT1E1P49888 294 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 TMPRSS15P98073 1019 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 SOX4Q06945 474 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 PRAMEF19Q5SWL8 479 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 BSPRYQ5W0U4 402 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 HEATR6Q6AI08 1181 aaKnown RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 DPP9Q86TI2 863 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 OSTM1Q86WC4 334 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 TP53INP2Q8IXH6 220 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 NDUFAF2Q8N183 169 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 LRRC52Q8N7C0 313 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 RSRC1Q96IZ7 334 aaKnown RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 NUDCD1Q96RS6 583 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 FRMD8Q9BZ67 464 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 GCOM2Q9BZD3 368 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 C20orf27Q9GZN8 174 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 NMUR2Q9GZQ4 415 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 PLEKHA5Q9HAU0 1116 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 SLC5A4Q9NY91 659 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 SEPT10Q9P0V9 454 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 LNPEPQ9UIQ6 1025 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 MTO1Q9Y2Z2 717 aaKnown RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 USP3Q9Y6I4 520 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 SBF1O95248 1867 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 BTBD19C9JJ37 291 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 TGDSO95455 350 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 F7P08709 466 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 DESP17661 470 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 GNAZP19086 355 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 TPSB2P20231 275 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 ACAT1P24752 427 aaKnown RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 GMPRP36959 345 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 RASSF2P50749 326 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 BCAT1P54687 386 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 SESN2P58004 480 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 OLIG2Q13516 323 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 NAA25Q14CX7 972 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 TPSAB1Q15661 275 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 FBXO47Q5MNV8 452 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 OTUD1Q5VV17 481 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 C16orf46Q6P387 395 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 CASC4Q6P4E1 433 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 ALKAL1Q6UXT8 129 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 DSTYKQ6XUX3 929 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 UNC93AQ86WB7 457 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 ARID3BQ8IVW6 561 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 STK32AQ8WU08 396 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 HTR3CQ8WXA8 447 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 E2F7Q96AV8 911 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 FAM149B1Q96BN6 582 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 SLC10A4Q96EP9 437 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 NSL1Q96IY1 281 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 TLE6Q9H808 572 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 GEMIN8Q9NWZ8 242 aaKnown RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 PIN4Q9Y237 131 aaKnown RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 DERAQ9Y315 318 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 PLXNB2O15031 1838 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 SMIM28A0A1B0GU29 152 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 BEST1O76090 585 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 TPBGLP0DKB5 382 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 SMIM10L2AP0DMW4 78 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 SMIM10L2BP0DMW5 78 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 NDUFV1P49821 464 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 CCNA1P78396 465 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 ADIGQ0VDE8 80 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 CBLBQ13191 982 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 SEMA5AQ13591 1074 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 DGKDQ16760 1214 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 DUSP28Q4G0W2 176 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 SPDYAQ5MJ70 313 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 C9orf131Q5VYM1 1079 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 NOTUMQ6P988 496 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 CES3Q6UWW8 571 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 ZDHHC17Q8IUH5 632 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 NUDCD3Q8IVD9 361 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 ADGRF2Q8IZF7 708 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 PDCD7Q8N8D1 485 aaKnown RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 MAML3Q96JK9 1138 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms