RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 FOXR1Q6PIV2 292 aa10.21□□□□□ -0.77
SMAD3-211ENST00000559460 ARL14Q8N4G2 192 aa10.21□□□□□ -0.77
SMAD3-211ENST00000559460 SYT2Q8N9I0 419 aaPredicted RBP10.21□□□□□ -0.77
SMAD3-211ENST00000559460 NOC3LQ8WTT2 800 aaKnown RBP10.21□□□□□ -0.77
SMAD3-211ENST00000559460 GOLGA1Q92805 767 aa10.21□□□□□ -0.77
SMAD3-211ENST00000559460 ELOVL2Q9NXB9 296 aa10.21□□□□□ -0.77
SMAD3-211ENST00000559460 PLA2G4CQ9UP65 541 aa10.21□□□□□ -0.77
SMAD3-211ENST00000559460 SATB2Q9UPW6 733 aa10.21□□□□□ -0.77
SMAD3-211ENST00000559460 OPA1O60313 960 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 MAGEC1O60732 1142 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 PFKFB2O60825 505 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 ALPPL2P10696 532 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 LMO2P25791 158 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 CHKAP35790 457 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 ATP5C1P36542 298 aaKnown RBP10.2□□□□□ -0.78
SMAD3-211ENST00000559460 TRAPPC10P48553 1259 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 PROX2Q3B8N5 592 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 LINC00303Q3SY05 128 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 SFMBT2Q5VUG0 894 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 ZNF776Q68DI1 518 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-211ENST00000559460 SLC39A4Q6P5W5 647 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 IGF2-ASQ6U949 168 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 KCNK18Q7Z418 384 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 IGSF22Q8N9C0 903 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 ZSCAN1Q8NBB4 408 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 OR6B3Q8NGW1 331 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 WBP2Q969T9 261 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 SGF29Q96ES7 293 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 ANKRD36BP1Q96IX9 119 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 SERAC1Q96JX3 654 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 PARVGQ9HBI0 331 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 TLR8Q9NR97 1041 aaKnown RBP10.2□□□□□ -0.78
SMAD3-211ENST00000559460 CABIN1Q9Y6J0 2220 aa10.2□□□□□ -0.78
SMAD3-211ENST00000559460 NPHP3-ACAD11A0A0J9YXS1 232 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 PP2D1A8MPX8 630 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 TLR4O00206 839 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 TIMM44O43615 452 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 SIGLEC6O43699 453 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 RNASEH1O60930 286 aaKnown RBP10.19□□□□□ -0.78
SMAD3-211ENST00000559460 SDC3O75056 442 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 TBCAO75347 108 aaKnown RBP10.19□□□□□ -0.78
SMAD3-211ENST00000559460 IGHV4-34P06331 123 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 PLA2G4BP0C869 781 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 WARSP23381 471 aaKnown RBP10.19□□□□□ -0.78
SMAD3-211ENST00000559460 RXRGP48443 463 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 SLC5A3P53794 718 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 NXPH1P58417 271 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 ZNF211Q13398 564 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-211ENST00000559460 CAMK2GQ13555 558 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-211ENST00000559460 SNX30Q5VWJ9 437 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 TMC6Q7Z403 805 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 KCTD17Q8N5Z5 321 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 KBTBD7Q8WVZ9 684 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 KCNN1Q92952 543 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 HPDLQ96IR7 371 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 SLC46A1Q96NT5 459 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 PSMG3-AS1Q96PY0 264 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 SEMA3CQ99985 751 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 FAM213AQ9BRX8 229 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 MED10Q9BTT4 135 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 ZNF518BQ9C0D4 1074 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 SLC25A18Q9H1K4 315 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 OSBPL2Q9H1P3 480 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 ERVMER34-1Q9H9K5 563 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 RBAKQ9NYW8 714 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-211ENST00000559460 FBXO10Q9UK96 956 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 ATXN7L1Q9ULK2 861 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-211ENST00000559460 TPX2Q9ULW0 747 aaKnown RBP10.19□□□□□ -0.78
SMAD3-211ENST00000559460 SCML1Q9UN30 329 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 ZNF510Q9Y2H8 683 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 SSUH2Q9Y2M2 353 aa10.19□□□□□ -0.78
SMAD3-211ENST00000559460 TEP1Q99973 2627 aaKnown RBP10.19□□□□□ -0.78
SMAD3-211ENST00000559460 MYH11P35749 1972 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 ANKRD63C9JTQ0 380 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 PRPF6O94906 941 aaKnown RBP10.18□□□□□ -0.78
SMAD3-211ENST00000559460 CLSTN1O94985 981 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 CTDNEP1O95476 244 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 LDHAP00338 332 aaKnown RBP10.18□□□□□ -0.78
SMAD3-211ENST00000559460 TNNC2P02585 160 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 WNT1P04628 370 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 ITGB6P18564 788 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 GNL1P36915 607 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-211ENST00000559460 DUSP3P51452 185 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-211ENST00000559460 CLN3Q13286 438 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 CDCP2Q5VXM1 449 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 NCEH1Q6PIU2 408 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 DTHD1Q6ZMT9 781 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 USP30Q70CQ3 517 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 TADA2BQ86TJ2 420 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 BRSK2Q8IWQ3 736 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 SCAMP5Q8TAC9 235 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 MAPK15Q8TD08 544 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 SORCS1Q8WY21 1168 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 GRAMD1AQ96CP6 724 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 PLIN2Q99541 437 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 REEP2Q9BRK0 252 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 KLF16Q9BXK1 252 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-211ENST00000559460 TM6SF1Q9BZW5 370 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 MTMR12Q9C0I1 747 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 FBXO44Q9H4M3 255 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms