RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SULT1E1P49888 294 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 IRAK1P51617 712 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 HDAC4P56524 1084 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 FAM133BQ5BKY9 247 aaKnown RBP11.35□□□□□ -0.59
TPM1-217ENST00000559108 ZC3H12AQ5D1E8 599 aaKnown RBP11.35□□□□□ -0.59
TPM1-217ENST00000559108 DNAJC24Q6P3W2 148 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 TXNDC11Q6PKC3 985 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 CYP4V2Q6ZWL3 525 aaPredicted RBP11.35□□□□□ -0.59
TPM1-217ENST00000559108 HTR3DQ70Z44 454 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 C12orf40Q86WS4 652 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 DENND1CQ8IV53 801 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 SFTPA1Q8IWL2 248 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 FAM217AQ8IXS0 508 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 ACRBPQ8NEB7 543 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 RNF139Q8WU17 664 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 DEPDC1BQ8WUY9 529 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 VCPIP1Q96JH7 1222 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 PDLIM2Q96JY6 352 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 BTBD6Q96KE9 485 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 TRMT61BQ9BVS5 477 aaKnown RBP11.35□□□□□ -0.59
TPM1-217ENST00000559108 EPHX3Q9H6B9 360 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 FAM204AQ9H8W3 233 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 C11orf16Q9NQ32 467 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 SLC2A4RGQ9NR83 387 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 HEBP1Q9NRV9 189 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 OLA1Q9NTK5 396 aaKnown RBP11.35□□□□□ -0.59
TPM1-217ENST00000559108 DDIT4Q9NX09 232 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM1-217ENST00000559108 MYO1AQ9UBC5 1043 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 STRIP2Q9ULQ0 834 aa11.35□□□□□ -0.59
TPM1-217ENST00000559108 HBS1LQ9Y450 684 aaKnown RBP11.35□□□□□ -0.59
TPM1-217ENST00000559108 MUC22E2RYF6 1773 aaPredicted RBP11.35□□□□□ -0.59
TPM1-217ENST00000559108 E2F8A0AVK6 867 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 KCNU1A8MYU2 1149 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 M0QYT0 321 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 DPYSL4O14531 572 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 TRDMT1O14717 391 aaKnown RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 CAPN9O14815 690 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 AKR1B10O60218 316 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 ENDOD1O94919 500 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 KRT3P12035 628 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 GPD1P21695 349 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 MRE11P49959 708 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 TBX4P57082 545 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 CCZ1BP86790 482 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 CCZ1P86791 482 aaPredicted RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 ZXDAP98168 799 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 ATP11AP98196 1134 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 NME3Q13232 169 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 CDO1Q16878 200 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 SLC25A52Q3SY17 297 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 RHBDF2Q6PJF5 856 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 ARCQ7LC44 396 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 TMEM25Q86YD3 366 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 CENPIQ92674 756 aaPredicted RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 EZH1Q92800 747 aaPredicted RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 GOLGA1Q92805 767 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 NXPE3Q969Y0 559 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 PLD4Q96BZ4 506 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 PRICKLE1Q96MT3 831 aaPredicted RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 PEBP4Q96S96 227 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 CDK5RAP1Q96SZ6 601 aaKnown RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 BAG1Q99933 345 aaPredicted RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 DESI2Q9BSY9 194 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 SELENOOQ9BVL4 669 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 KCNF1Q9H3M0 494 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 BRD9Q9H8M2 597 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 FBRSL1Q9HCM7 1045 aaKnown RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 OSGEPQ9NPF4 335 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 ZNHIT6Q9NWK9 470 aaKnown RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 DUS2Q9NX74 493 aaKnown RBP11.34□□□□□ -0.59
TPM1-217ENST00000559108 WDR35Q9P2L0 1181 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 SALL4Q9UJQ4 1053 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 CLEC4EQ9ULY5 219 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 TLR6Q9Y2C9 796 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 SH3BP1Q9Y3L3 701 aa11.34□□□□□ -0.59
TPM1-217ENST00000559108 ANKRD62A6NC57 917 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 TRIM24O15164 1050 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 NDUFA10O95299 355 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 PDGFRAP16234 1089 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 CD72P21854 359 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 PTPN9P43378 593 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 CXCR3P49682 368 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 NNTQ13423 1086 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 ARHGAP29Q52LW3 1261 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 LY6G5CQ5SRR4 150 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 PIK3R6Q5UE93 754 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 TXNRD3NBQ6F5E7 133 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 C14orf80Q86SX3 495 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 FAM131BQ86XD5 332 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 ADGRG2Q8IZP9 1017 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 ZNF687Q8N1G0 1237 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 CCDC185Q8N715 623 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 MSANTD4Q8NCY6 345 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 E2F7Q96AV8 911 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 PGAP3Q96FM1 320 aaPredicted RBP11.33□□□□□ -0.6
TPM1-217ENST00000559108 CCDC42Q96M95 316 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 SERPINB11Q96P15 392 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 PRMT1Q99873 361 aaKnown RBP11.33□□□□□ -0.6
TPM1-217ENST00000559108 NUP85Q9BW27 656 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms