RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 RPS19P39019 145 aaKnown RBP6.72□□□□□ -1.33
LRRC28-209ENST00000558861 IL12RB1P42701 662 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 MRPL12P52815 198 aaKnown RBP6.72□□□□□ -1.33
LRRC28-209ENST00000558861 RHDQ02161 417 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 HLTFQ14527 1009 aaKnown RBP eCLIP6.72□□□□□ -1.33
LRRC28-209ENST00000558861 GRM7Q14831 915 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 PGM5Q15124 567 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 PRAMEF19Q5SWL8 479 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 GALNT17Q6IS24 598 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 TCTN3Q6NUS6 607 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 SWSAP1Q6NVH7 229 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 XYLT1Q86Y38 959 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 SH2D3CQ8N5H7 860 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 FAM156AQ8NDB6 213 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CCDC148Q8NFR7 591 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CUL5Q93034 780 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CDK5RAP3Q96JB5 506 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 ZNF512Q96ME7 567 aaPredicted RBP6.72□□□□□ -1.33
LRRC28-209ENST00000558861 MBOAT7Q96N66 472 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 NT5C1BQ96P26 610 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 IWS1Q96ST2 819 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 GLT8D2Q9H1C3 349 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 PDGFCQ9NRA1 345 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 MOCS1Q9NZB8 636 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CALCOCO1Q9P1Z2 691 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 ADD3Q9UEY8 706 aaKnown RBP6.72□□□□□ -1.33
LRRC28-209ENST00000558861 SLC23A1Q9UHI7 598 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 PCDHA6Q9UN73 950 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 POLHQ9Y253 713 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 PLXNA1Q9UIW2 1896 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-209ENST00000558861 NPEPPSL1A6NEC2 478 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 ASB14A6NK59 587 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 BTBD18B2RXH4 712 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 KIF28PB7ZC32 967 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 GPR42O15529 346 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 SEPT4O43236 478 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 FOXS1O43638 330 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 FOSP01100 380 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-209ENST00000558861 MYL1P05976 194 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 U2AF2P26368 475 aaKnown RBP eCLIP6.71□□□□□ -1.34
LRRC28-209ENST00000558861 GJB2P29033 226 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 GNA11P29992 359 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 ICAM3P32942 547 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 DDIT3P35638 169 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 AGFG1P52594 562 aaKnown RBP6.71□□□□□ -1.34
LRRC28-209ENST00000558861 RAB1AP62820 205 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 AKAP17AQ02040 695 aaKnown RBP6.71□□□□□ -1.34
LRRC28-209ENST00000558861 ACVR2BQ13705 512 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 SLC9C1Q4G0N8 1177 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 ANO6Q4KMQ2 910 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 FKBP15Q5T1M5 1219 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 JAKMIP3Q5VZ66 844 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 XRRA1Q6P2D8 792 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 CCDC149Q6ZUS6 474 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 LIMS2Q7Z4I7 341 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 UBE2Q1Q7Z7E8 422 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 DAAM2Q86T65 1068 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 PLXDC1Q8IUK5 500 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 FBXO16Q8IX29 292 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-209ENST00000558861 BLIDQ8IZY5 108 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 FUKQ8N0W3 1084 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 CYP2W1Q8TAV3 490 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 CCDC12Q8WUD4 166 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-209ENST00000558861 WASF1Q92558 559 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 SLC35A4Q96G79 324 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 ABHD8Q96I13 439 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 PGBD1Q96JS3 809 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 MRI1Q9BV20 369 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 SARGQ9BW04 601 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 LSM14BQ9BX40 385 aaKnown RBP6.71□□□□□ -1.34
LRRC28-209ENST00000558861 C11orf54Q9H0W9 315 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-209ENST00000558861 ABHD16BQ9H3Z7 469 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 C6orf50Q9HD87 102 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 MAN1C1Q9NR34 630 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 PLA2G3Q9NZ20 509 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 FAM50BQ9Y247 325 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 SH3BP1Q9Y3L3 701 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 UBIAD1Q9Y5Z9 338 aa6.71□□□□□ -1.34
LRRC28-209ENST00000558861 CYP3A7-CYP3A51PA0A087WV96 503 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 NT5C1B-RDH14C9J2C7 533 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 FAM86B1E9PN63 330 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 H3BUI4 141 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 TEX33O43247 280 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 EIF3JO75822 258 aaKnown RBP6.7□□□□□ -1.34
LRRC28-209ENST00000558861 ZBED1O96006 694 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 GJB1P08034 283 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 SBK3P0C264 359 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 FAM86B2P0C5J1 330 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 CCL5P13501 91 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 CYP3A7P24462 503 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 MSX2P35548 267 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-209ENST00000558861 NLRP5P59047 1200 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 UBXN2AP68543 259 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 NKX6-1P78426 367 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-209ENST00000558861 SP2Q02086 613 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 GUCY1B3Q02153 619 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 FOXL1Q12952 345 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 STXBP2Q15833 593 aa6.7□□□□□ -1.34
LRRC28-209ENST00000558861 ZFYVE27Q5T4F4 411 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms