RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 FSCN3Q9NQT6 498 aa5□□□□□ -1.61
CASC4-206ENST00000558847 ZNHIT2Q9UHR6 403 aa5□□□□□ -1.61
CASC4-206ENST00000558847 CCNL1Q9UK58 526 aaPredicted RBP5□□□□□ -1.61
CASC4-206ENST00000558847 DERAQ9Y315 318 aa5□□□□□ -1.61
CASC4-206ENST00000558847 RRP7AQ9Y3A4 280 aaKnown RBP5□□□□□ -1.61
CASC4-206ENST00000558847 ADGRA2Q96PE1 1338 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 PCSK5Q92824 1860 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 HNRNPRO43390 633 aaKnown RBP4.99□□□□□ -1.61
CASC4-206ENST00000558847 PMPCBO75439 489 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 CER1O95813 267 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 FESP07332 822 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 IL6RP08887 468 aaPredicted RBP4.99□□□□□ -1.61
CASC4-206ENST00000558847 TNNT1P13805 278 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 ZFXP17010 805 aaPredicted RBP4.99□□□□□ -1.61
CASC4-206ENST00000558847 MATN1P21941 496 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 PROZP22891 400 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 ELF1P32519 619 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 KRT9P35527 623 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 HNRNPMP52272 730 aaKnown RBP eCLIP4.99□□□□□ -1.61
CASC4-206ENST00000558847 RBM5P52756 815 aaKnown RBP eCLIP4.99□□□□□ -1.61
CASC4-206ENST00000558847 PDE1AP54750 535 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 TXNL4AP83876 142 aaKnown RBP4.99□□□□□ -1.61
CASC4-206ENST00000558847 COL10A1Q03692 680 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 MTAPQ13126 283 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 SLC12A1Q13621 1099 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 AASDHQ4L235 1098 aaPredicted RBP4.99□□□□□ -1.61
CASC4-206ENST00000558847 MAP3K21Q5TCX8 1036 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 FAM90A2PQ658T7 463 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 RETSATQ6NUM9 610 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 MSANTD2Q6P1R3 559 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 PIK3AP1Q6ZUJ8 805 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 PARS2Q7L3T8 475 aaKnown RBP4.99□□□□□ -1.61
CASC4-206ENST00000558847 RSRC2Q7L4I2 434 aaKnown RBP4.99□□□□□ -1.61
CASC4-206ENST00000558847 METTL25Q8N6Q8 603 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 CEP70Q8NHQ1 597 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 SKA1Q96BD8 255 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 COG8Q96MW5 612 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 EIF2AK1Q9BQI3 630 aaKnown RBP4.99□□□□□ -1.61
CASC4-206ENST00000558847 KCNK9Q9NPC2 374 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 ZBTB1Q9Y2K1 713 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 TNFRSF18Q9Y5U5 241 aa4.99□□□□□ -1.61
CASC4-206ENST00000558847 MBD3L5A6NJ08 208 aaPredicted RBP4.98□□□□□ -1.61
CASC4-206ENST00000558847 B9A039 149 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 URI1O94763 535 aaPredicted RBP4.98□□□□□ -1.61
CASC4-206ENST00000558847 PDHA1P08559 390 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 CNPP09543 421 aaKnown RBP4.98□□□□□ -1.61
CASC4-206ENST00000558847 HKR1P10072 659 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 CKMT1AP12532 417 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 RXRAP19793 462 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 YY1P25490 414 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 PBX1P40424 430 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 MAPK7Q13164 816 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 BFSP2Q13515 415 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 HECTD2Q5U5R9 776 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 WDR78Q5VTH9 848 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 ANKRD16Q6P6B7 361 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 PTCHD4Q6ZW05 846 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 RRAGAQ7L523 313 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 PCGF5Q86SE9 256 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 LCORLQ8N3X6 602 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 ESX1Q8N693 406 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 PNPLA1Q8N8W4 532 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 FSIP1Q8NA03 581 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 SIMC1Q8NDZ2 872 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 ABHD11Q8NFV4 315 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 SLC9A6Q92581 669 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 MAELQ96JY0 434 aaKnown RBP4.98□□□□□ -1.61
CASC4-206ENST00000558847 COQ10AQ96MF6 247 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 SLC26A6Q9BXS9 759 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 PRDM16Q9HAZ2 1276 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 UBN1Q9NPG3 1134 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 ARHGEF3Q9NR81 526 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 AMFRQ9UKV5 643 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 COL4A3Q01955 1670 aa4.98□□□□□ -1.61
CASC4-206ENST00000558847 WDR27A2RRH5 827 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 C3orf70A6NLC5 250 aaPredicted RBP4.97□□□□□ -1.61
CASC4-206ENST00000558847 KIF28PB7ZC32 967 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 GCOM1H8Y6P7 765 aaPredicted RBP4.97□□□□□ -1.61
CASC4-206ENST00000558847 NKX2-8O15522 239 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 KRT38O76015 456 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 LMNAP02545 664 aaKnown RBP4.97□□□□□ -1.61
CASC4-206ENST00000558847 POLBP06746 335 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 RHOP08100 348 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 NPSP0C0P6 89 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 MYCLP12524 364 aaPredicted RBP4.97□□□□□ -1.61
CASC4-206ENST00000558847 CNTFP26441 200 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 MAN1A1P33908 653 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 PCP4P48539 62 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 CLCN2P51788 898 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 GEMIN4P57678 1058 aaKnown RBP4.97□□□□□ -1.61
CASC4-206ENST00000558847 RBM6P78332 1123 aaKnown RBP4.97□□□□□ -1.61
CASC4-206ENST00000558847 MRPS21P82921 87 aaKnown RBP4.97□□□□□ -1.61
CASC4-206ENST00000558847 SP2Q02086 613 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 TLE3Q04726 772 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 CHRNDQ07001 517 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 LMOD3Q0VAK6 560 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 G3BP1Q13283 466 aaKnown RBP eCLIP4.97□□□□□ -1.61
CASC4-206ENST00000558847 FHL3Q13643 280 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 AAK1Q2M2I8 961 aa4.97□□□□□ -1.61
CASC4-206ENST00000558847 KIAA0895LQ68EN5 471 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms