RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 CSPG4P5Q96PW8 444 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 DHX35Q9H5Z1 703 aaKnown RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 USP29Q9HBJ7 922 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 GOLGA6AQ9NYA3 693 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 CWC15Q9P013 229 aaKnown RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 GREB1Q4ZG55 1949 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 ARHGEF37A1IGU5 675 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 SGK1O00141 431 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 TNFRSF10BO14763 440 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 MCF2LO15068 1137 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 LTFP02788 710 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 CA3P07451 260 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 OR4Q2P0C623 313 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 RDXP35241 583 aaKnown RBP13.44□□□□□ -0.26
SMAD3-207ENST00000558763 SLC10A2Q12908 348 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-207ENST00000558763 B4GALNT4Q76KP1 1039 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 PSTKQ8IV42 348 aaKnown RBP13.44□□□□□ -0.26
SMAD3-207ENST00000558763 ZCCHC9Q8N567 271 aaKnown RBP13.44□□□□□ -0.26
SMAD3-207ENST00000558763 BBOF1Q8ND07 529 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 EXOC4Q96A65 974 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 PGAP3Q96FM1 320 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-207ENST00000558763 TMEM169Q96HH4 297 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 ATP6V1G3Q96LB4 118 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 ZCWPW1Q9H0M4 648 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 ETNK2Q9NVF9 386 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 MFHAS1Q9Y4C4 1052 aa13.44□□□□□ -0.26
SMAD3-207ENST00000558763 LINC01553A4QN01 128 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 M0QYT0 321 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 APOL1O14791 398 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 IFNB1P01574 187 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 DESP17661 470 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 CTNNB1P35222 781 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 RPL22P35268 128 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 PBX2P40425 430 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 TSPY1Q01534 308 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 GBE1Q04446 702 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 SEMA3BQ13214 749 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 MRPL58Q14197 206 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 MAPRE1Q15691 268 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 KCTD16Q68DU8 428 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 C1orf228Q6PIY5 440 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 CHRDL2Q6WN34 429 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 TRMT10CQ7L0Y3 403 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 TAS1R1Q7RTX1 841 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 CCDC25Q86WR0 208 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 THEM5Q8N1Q8 247 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 FAM71DQ8N9W8 422 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 IRGQQ8WZA9 623 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 PRCCQ92733 491 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 P3H4Q92791 437 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 CLP1Q92989 425 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 RTP4Q96DX8 246 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 VN1R3Q9BXE9 311 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 DNAJC17Q9NVM6 304 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 TPX2Q9ULW0 747 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 STAP1Q9ULZ2 295 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 PCDHB12Q9Y5F1 795 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 GOT1P17174 413 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 PGFP49763 221 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 EIF3BP55884 814 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 MLLT1Q03111 559 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 SCAPQ12770 1279 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 EIF4EBP2Q13542 120 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 MORF4L2Q15014 288 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 FAM182AQ5T1J6 154 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 EMC10Q5UCC4 262 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 ANKRD22Q5VYY1 191 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 DENND2CQ68D51 928 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 NCBP2-AS2Q69YL0 99 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 ZC3H18Q86VM9 953 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 TDHQ8IZJ6 230 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 SCAMP5Q8TAC9 235 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 ADAM32Q8TC27 787 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 CPT1BQ92523 772 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 NTAN1Q96AB6 310 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 C17orf80Q9BSJ5 609 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 TMEM109Q9BVC6 243 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 MAK16Q9BXY0 300 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 PSD3Q9NYI0 1048 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 SPG21Q9NZD8 308 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 RCOR3Q9P2K3 495 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 SHOC2Q9UQ13 582 aa13.43□□□□□ -0.26
SMAD3-207ENST00000558763 YBX2Q9Y2T7 364 aaKnown RBP13.43□□□□□ -0.26
SMAD3-207ENST00000558763 SYN3O14994 580 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 FGF18O76093 207 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 CSPG5O95196 566 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 MAP3K6O95382 1288 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 IGLV3-25P01717 112 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 PPM1AP35813 382 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 ROR1Q01973 937 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 GAD2Q05329 585 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 ELAVL2Q12926 359 aaKnown RBP13.42□□□□□ -0.26
SMAD3-207ENST00000558763 RTP2Q5QGT7 225 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 VARS2Q5ST30 1063 aaKnown RBP13.42□□□□□ -0.26
SMAD3-207ENST00000558763 GOLGA6L1Q8N7Z2 621 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 NAT8LQ8N9F0 302 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-207ENST00000558763 OLFM3Q96PB7 478 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 PBX4Q9BYU1 374 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms