RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 KLKB1P03952 638 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 ARSAP15289 507 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 PDGFRAP16234 1089 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 GPD1P21695 349 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 SDC4P31431 198 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 GBP1P32455 592 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 CYLC1P35663 651 aaPredicted RBP18.16■□□□□ 0.5
TPM1-214ENST00000558544 PDGFRLQ15198 375 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 CDO1Q16878 200 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 SLC25A52Q3SY17 297 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 Q6ZNB5 142 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 TMEM139Q8IV31 216 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 DENND1CQ8IV53 801 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 UBALD2Q8IYN6 164 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 CCDC170Q8IYT3 715 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 TTC8Q8TAM2 541 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 NT5C3BQ969T7 300 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 ARHGEF26Q96DR7 871 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 SLC39A13Q96H72 371 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 FCRL2Q96LA5 508 aaPredicted RBP18.16■□□□□ 0.5
TPM1-214ENST00000558544 DCLK3Q9C098 648 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 HPS4Q9NQG7 708 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 GTSE1Q9NYZ3 720 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 SCINQ9Y6U3 715 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 KIAA1549LQ6ZVL6 1849 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 SLC9A3R1O14745 358 aaPredicted RBP18.15■□□□□ 0.5
TPM1-214ENST00000558544 DCXO43602 365 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 HARS2P49590 506 aaKnown RBP18.15■□□□□ 0.5
TPM1-214ENST00000558544 ZXDAP98168 799 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 ATP11AP98196 1134 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 RING1Q06587 406 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 EIF4EBP2Q13542 120 aaPredicted RBP18.15■□□□□ 0.5
TPM1-214ENST00000558544 C15orf59Q2T9L4 293 aaPredicted RBP18.15■□□□□ 0.5
TPM1-214ENST00000558544 CCDC14Q49A88 953 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 ZC3H12AQ5D1E8 599 aaKnown RBP18.15■□□□□ 0.5
TPM1-214ENST00000558544 NUGGCQ68CJ6 796 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 KIAA1958Q8N8K9 716 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 CSGALNACT1Q8TDX6 532 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 ANP32BQ92688 251 aaKnown RBP18.15■□□□□ 0.5
TPM1-214ENST00000558544 DNASE1L2Q92874 299 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 PIGVQ9NUD9 493 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 TBC1D14Q9P2M4 693 aa18.15■□□□□ 0.5
TPM1-214ENST00000558544 AGO1Q9UL18 857 aaKnown RBP18.15■□□□□ 0.5
TPM1-214ENST00000558544 MOCS2O96007 188 aaPredicted RBP18.14■□□□□ 0.49
TPM1-214ENST00000558544 CYP1A2P05177 515 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 H2AFZP0C0S5 128 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 PTPN9P43378 593 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 ATXN1P54253 815 aaKnown RBP18.14■□□□□ 0.49
TPM1-214ENST00000558544 PFKPQ01813 784 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 OGDHQ02218 1023 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 DEUP1Q05D60 604 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 RUNX3Q13761 415 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 IER5LQ5T953 404 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 SH3PXD2AQ5TCZ1 1133 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 RAD9BQ6WBX8 426 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 H2AFVQ71UI9 128 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 UNC45BQ8IWX7 931 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 CTNNBL1Q8WYA6 563 aaPredicted RBP18.14■□□□□ 0.49
TPM1-214ENST00000558544 ATP2A3Q93084 1043 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 RNF34Q969K3 372 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 PGAP3Q96FM1 320 aaPredicted RBP18.14■□□□□ 0.49
TPM1-214ENST00000558544 TRIM7Q9C029 511 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 MRPL47Q9HD33 250 aaKnown RBP18.14■□□□□ 0.49
TPM1-214ENST00000558544 HEBP1Q9NRV9 189 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 CA14Q9ULX7 337 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 ZNF510Q9Y2H8 683 aa18.14■□□□□ 0.49
TPM1-214ENST00000558544 OTOL1A6NHN0 477 aaPredicted RBP18.13■□□□□ 0.49
TPM1-214ENST00000558544 CCP110O43303 1012 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 NDUFA10O95299 355 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 LCA5LO95447 670 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 NFATC1O95644 943 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 APOEP02649 317 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 ZNF143P52747 638 aaPredicted RBP18.13■□□□□ 0.49
TPM1-214ENST00000558544 VCPP55072 806 aaKnown RBP18.13■□□□□ 0.49
TPM1-214ENST00000558544 RAB6CQ53S08 254 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 SND1Q7KZF4 910 aaKnown RBP eCLIP18.13■□□□□ 0.49
TPM1-214ENST00000558544 BNIPLQ7Z465 357 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 CPA6Q8N4T0 437 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 FAM172AQ8WUF8 416 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 OTUB2Q96DC9 234 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 NUP85Q9BW27 656 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 RAB6CQ9H0N0 254 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 ECT2Q9H8V3 914 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 TRPV5Q9NQA5 729 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.13■□□□□ 0.49
TPM1-214ENST00000558544 FBXL21Q9UKT6 434 aa18.13■□□□□ 0.49
TPM1-214ENST00000558544 EPN1Q9Y6I3 576 aaPredicted RBP18.13■□□□□ 0.49
TPM1-214ENST00000558544 TMEM191CA6NGB0 347 aa18.12■□□□□ 0.49
TPM1-214ENST00000558544 EIF3CLB5ME19 914 aaKnown RBP18.12■□□□□ 0.49
TPM1-214ENST00000558544 TNFRSF10AO00220 468 aa18.12■□□□□ 0.49
TPM1-214ENST00000558544 CYP17A1P05093 508 aa18.12■□□□□ 0.49
TPM1-214ENST00000558544 TMEM253P0C7T8 217 aa18.12■□□□□ 0.49
TPM1-214ENST00000558544 CCR1P32246 355 aa18.12■□□□□ 0.49
TPM1-214ENST00000558544 RDXP35241 583 aaKnown RBP18.12■□□□□ 0.49
TPM1-214ENST00000558544 SOX9P48436 509 aa18.12■□□□□ 0.49
TPM1-214ENST00000558544 SPA17Q15506 151 aa18.12■□□□□ 0.49
TPM1-214ENST00000558544 ITPRIPL2Q3MIP1 535 aa18.12■□□□□ 0.49
TPM1-214ENST00000558544 ADGRG2Q8IZP9 1017 aa18.12■□□□□ 0.49
TPM1-214ENST00000558544 EIF3CQ99613 913 aaKnown RBP18.12■□□□□ 0.49
TPM1-214ENST00000558544 XPO7Q9UIA9 1087 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms