RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ZNF217O75362 1048 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 CALCAP01258 141 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 SPINK2P20155 84 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 MFAP3P55082 362 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 LRRC63Q05C16 580 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 GFPT1Q06210 699 aaPredicted RBP16.26■□□□□ 0.19
TPM1-211ENST00000558314 RAB41Q5JT25 222 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 TMEM270Q6UE05 265 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 OR2I1PQ8NGU4 316 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 SORCS1Q8WY21 1168 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 GABRG3Q99928 467 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 UBXN6Q9BZV1 441 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 EVLQ9UI08 416 aaPredicted RBP16.26■□□□□ 0.19
TPM1-211ENST00000558314 PILRBQ9UKJ0 227 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 CLEC4EQ9ULY5 219 aa16.26■□□□□ 0.19
TPM1-211ENST00000558314 BIN1O00499 593 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 MSI1O43347 362 aaKnown RBP16.25■□□□□ 0.19
TPM1-211ENST00000558314 PENKP01210 267 aaPredicted RBP16.25■□□□□ 0.19
TPM1-211ENST00000558314 VDRP11473 427 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 DPP6P42658 865 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 IL12RB1P42701 662 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 FMO5P49326 533 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 HARS2P49590 506 aaKnown RBP16.25■□□□□ 0.19
TPM1-211ENST00000558314 NUCB2P80303 420 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 DUOXA1Q1HG43 343 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 FUT11Q495W5 492 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 ANKS1BQ7Z6G8 1248 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 PPM1KQ8N3J5 372 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 HDDC3Q8N4P3 179 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 ENGASEQ8NFI3 743 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 SLC35C1Q96A29 364 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 PLD4Q96BZ4 506 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 MRGPRX1Q96LB2 322 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 NT5C1BQ96P26 610 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 PRDM16Q9HAZ2 1276 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 SLC6A14Q9UN76 642 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 CACNA1BQ00975 2339 aa16.25■□□□□ 0.19
TPM1-211ENST00000558314 YJEFN3A6XGL0 299 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 MEI4A8MW99 385 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 E7ENQ6 273 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 M0QYV0 167 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
TPM1-211ENST00000558314 TBXAS1P24557 533 aaPredicted RBP16.24■□□□□ 0.19
TPM1-211ENST00000558314 BRD2P25440 801 aaKnown RBP16.24■□□□□ 0.19
TPM1-211ENST00000558314 MAOBP27338 520 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 STX17P56962 302 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 SPDYCQ5MJ68 293 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 BSPRYQ5W0U4 402 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 RRAGAQ7L523 313 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 SLC41A1Q8IVJ1 513 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 ZNF276Q8N554 614 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 CEP76Q8TAP6 659 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 KAT5Q92993 513 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 MIR1-1HGQ9H1L0 117 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 SLC32A1Q9H598 525 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 METTL14Q9HCE5 456 aaKnown RBP16.24■□□□□ 0.19
TPM1-211ENST00000558314 OLA1Q9NTK5 396 aaKnown RBP16.24■□□□□ 0.19
TPM1-211ENST00000558314 ELOVL2Q9NXB9 296 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 MAN1B1Q9UKM7 699 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 CTNND2Q9UQB3 1225 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 COQ4Q9Y3A0 265 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 EPG5Q9HCE0 2579 aa16.24■□□□□ 0.19
TPM1-211ENST00000558314 CHD8Q9HCK8 2581 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 O00370 1275 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 GFRA2O00451 464 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 EPHX1P07099 455 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 SETSIPP0DME0 302 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 ACADMP11310 421 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 HLA-EP13747 358 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 CETN1Q12798 172 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 ZNF234Q14588 700 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 PLEKHG6Q3KR16 790 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 FNDC3BQ53EP0 1204 aaKnown RBP16.23■□□□□ 0.19
TPM1-211ENST00000558314 COBLL1Q53SF7 1204 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 PM20D1Q6GTS8 502 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 SLC23A3Q6PIS1 610 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 SERPINA13PQ6UXR4 307 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 FAM124AQ86V42 546 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 CREBRFQ8IUR6 639 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 ZC3H3Q8IXZ2 948 aaKnown RBP16.23■□□□□ 0.19
TPM1-211ENST00000558314 NELFBQ8WX92 580 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 TFAP2BQ92481 460 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 DHTKD1Q96HY7 919 aaPredicted RBP16.23■□□□□ 0.19
TPM1-211ENST00000558314 MIS12Q9H081 205 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 THAP10Q9P2Z0 257 aaPredicted RBP16.23■□□□□ 0.19
TPM1-211ENST00000558314 FBXO10Q9UK96 956 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 SLC27A6Q9Y2P4 619 aa16.23■□□□□ 0.19
TPM1-211ENST00000558314 SPAARA0A1B0GVQ0 90 aa16.22■□□□□ 0.19
TPM1-211ENST00000558314 OPHN1O60890 802 aa16.22■□□□□ 0.19
TPM1-211ENST00000558314 TOP3BO95985 862 aaKnown RBP16.22■□□□□ 0.19
TPM1-211ENST00000558314 SERPINF2P08697 491 aa16.22■□□□□ 0.19
TPM1-211ENST00000558314 CEACAM1P13688 526 aa16.22■□□□□ 0.19
TPM1-211ENST00000558314 CSRP1P21291 193 aaKnown RBP16.22■□□□□ 0.19
TPM1-211ENST00000558314 PRKCHP24723 683 aa16.22■□□□□ 0.19
TPM1-211ENST00000558314 CD6P30203 668 aa16.22■□□□□ 0.19
TPM1-211ENST00000558314 MPPE1Q53F39 396 aa16.22■□□□□ 0.19
TPM1-211ENST00000558314 SYCP2LQ5T4T6 812 aa16.22■□□□□ 0.19
TPM1-211ENST00000558314 BHLHA9Q7RTU4 235 aa16.22■□□□□ 0.19
TPM1-211ENST00000558314 TMPRSS6Q8IU80 811 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms