RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 RSPH3Q86UC2 560 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 TDRPQ86YL5 185 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM1-210ENST00000558264 PPM1NQ8N819 430 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 STKLD1Q8NE28 680 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 KLC2Q9H0B6 622 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 ARHGEF4Q9NR80 690 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 ZNF638Q14966 1978 aaKnown RBP10.93□□□□□ -0.66
TPM1-210ENST00000558264 CHADO15335 359 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 ASMTLO95671 621 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 ITGB1P05556 798 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 NCAM1P13591 858 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 RPL34P49207 117 aaKnown RBP10.93□□□□□ -0.66
TPM1-210ENST00000558264 IL9RQ01113 521 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 ACTN3Q08043 901 aaPredicted RBP10.93□□□□□ -0.66
TPM1-210ENST00000558264 PTK7Q13308 1070 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 HEATR6Q6AI08 1181 aaKnown RBP10.93□□□□□ -0.66
TPM1-210ENST00000558264 SMYD5Q6GMV2 418 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 LVRNQ6Q4G3 990 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 PPP1R21Q6ZMI0 780 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 SERINC5Q86VE9 423 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 CDKL3Q8IVW4 592 aaPredicted RBP10.93□□□□□ -0.66
TPM1-210ENST00000558264 UNC5BQ8IZJ1 945 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 VPS52Q8N1B4 723 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 RNF139Q8WU17 664 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 DEPDC1BQ8WUY9 529 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 RMDN2Q96LZ7 410 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 MAGEB18Q96M61 343 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 PLAC1Q9HBJ0 212 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 SLC17A6Q9P2U8 582 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 ZC3H7BQ9UGR2 993 aaKnown RBP10.93□□□□□ -0.66
TPM1-210ENST00000558264 SLC24A2Q9UI40 661 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 USP3Q9Y6I4 520 aa10.93□□□□□ -0.66
TPM1-210ENST00000558264 ATXN2Q99700 1313 aaKnown RBP10.93□□□□□ -0.66
TPM1-210ENST00000558264 DAB1O75553 588 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 SCTRP47872 440 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 FCGRTP55899 365 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 BMPR2Q13873 1038 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 KLHL38Q2WGJ6 581 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 TRMT10BQ6PF06 316 aaKnown RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 ZNF534Q76KX8 674 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 STRADAQ7RTN6 431 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 SPATA21Q7Z572 469 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 DENND1AQ8TEH3 1009 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 SERAC1Q96JX3 654 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 SPC25Q9HBM1 224 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 POPDC2Q9HBU9 364 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 HAUS2Q9NVX0 235 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 GGA2Q9UJY4 613 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 MAGED2Q9UNF1 606 aaPredicted RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 USP15Q9Y4E8 981 aaPredicted RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 ACTL7BQ9Y614 415 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 MYO18AQ92614 2054 aaKnown RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 TRPM7Q96QT4 1865 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 KCNK1O00180 336 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 NDC80O14777 642 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 TYROBPO43914 113 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 ATP2A2P16615 1042 aaKnown RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 BDNFP23560 247 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 NOS2P35228 1153 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 IRF5Q13568 498 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 SPARCL1Q14515 664 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 HHATQ5VTY9 493 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 ADGRD1Q6QNK2 874 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 TRPM8Q7Z2W7 1104 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 CCDC63Q8NA47 563 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 TCP10LQ8TDR4 215 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 MYLPFQ96A32 169 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 CYTH2Q99418 400 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 NPY6RQ99463 290 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 ADAM2Q99965 735 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 PITPNM3Q9BZ71 974 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 SMYD2Q9NRG4 433 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 SLC38A7Q9NVC3 462 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 TMLHEQ9NVH6 421 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 DDIT4Q9NX09 232 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 IL1RAPL1Q9NZN1 696 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 NOD1Q9Y239 953 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 TTLL3Q9Y4R7 772 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 IKBKGQ9Y6K9 419 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 ADAMTS4O75173 837 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 FSBPO95073 299 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 CPP00450 1065 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 OAS1P00973 400 aaKnown RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 INHBAP08476 426 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 F7P08709 466 aaPredicted RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 PRKAR2AP13861 404 aaKnown RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 MGAT3Q09327 533 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 NR1H3Q13133 447 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 MZB1Q8WU39 189 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 TFB1MQ8WVM0 346 aaKnown RBP10.92□□□□□ -0.66
TPM1-210ENST00000558264 HTR3CQ8WXA8 447 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 RTP4Q96DX8 246 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 SGSM3Q96HU1 749 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 QKIQ96PU8 341 aaKnown RBP eCLIP10.92□□□□□ -0.661e-8■■■■■ 42
TPM1-210ENST00000558264 RTP3Q9BQQ7 232 aa10.92□□□□□ -0.66
TPM1-210ENST00000558264 SCN10AQ9Y5Y9 1956 aa10.91□□□□□ -0.66
TPM1-210ENST00000558264 CFAP69A5D8W1 941 aa10.91□□□□□ -0.66
TPM1-210ENST00000558264 RNF103O00237 685 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms