RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 FOXN2P32314 431 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 RPA3P35244 121 aaPredicted RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 RGS2P41220 211 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 ELK3P41970 407 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 MAGEA3P43357 314 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 MMP16P51512 607 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 HDAC4P56524 1084 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 YWHAZP63104 245 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 ATP11AP98196 1134 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 ORC1Q13415 861 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 SEMA5AQ13591 1074 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 FRG1Q14331 258 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 FASTKD3Q14CZ7 662 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 PARP6Q2NL67 630 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 C15orf59Q2T9L4 293 aaPredicted RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 GJC2Q5T442 439 aaPredicted RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 ARMC3Q5W041 872 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 FBXW10Q5XX13 1052 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 HEATR6Q6AI08 1181 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 TRNP1Q6NT89 227 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 C1orf228Q6PIY5 440 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 TIFABQ6ZNK6 161 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 BEND5Q7L4P6 421 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 PRUNE1Q86TP1 453 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 TLK2Q86UE8 772 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 ZC3H18Q86VM9 953 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 RETREG3Q86VR2 466 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 ADGRF2Q8IZF7 708 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 AGGF1Q8N302 714 aaeCLIP8.61□□□□□ -1.03
SPG11-209ENST00000558253 C12orf29Q8N999 325 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 B3GALNT2Q8NCR0 500 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 GDAP1Q8TB36 358 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 ACMSDQ8TDX5 336 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 MZB1Q8WU39 189 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 TFB1MQ8WVM0 346 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 ZNF75CPQ92670 426 aaPredicted RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 INPP5DQ92835 1189 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 NT5C3BQ969T7 300 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 ZBTB10Q96DT7 871 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 APOPT1Q96IL0 206 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 TMEM237Q96Q45 408 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 LRRC37BQ96QE4 947 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 PAIP2Q9BPZ3 127 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 EIF2AQ9BY44 585 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 IQCGQ9H095 443 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 FAM49AQ9H0Q0 323 aaPredicted RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 CXorf56Q9H5V9 222 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 ARHGEF3Q9NR81 526 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.61□□□□□ -1.03
SPG11-209ENST00000558253 SAE1Q9UBE0 346 aaPredicted RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 TUBGCP4Q9UGJ1 667 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 ZC3H7BQ9UGR2 993 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 AP4E1Q9UPM8 1137 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 PIN4Q9Y237 131 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 MTO1Q9Y2Z2 717 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 PLXNA1Q9UIW2 1896 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 SDR42E2A6NKP2 422 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 ERI2A8K979 691 aaKnown RBP8.6□□□□□ -1.03
SPG11-209ENST00000558253 C9IYK1 514 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 GOLGA8MH3BSY2 632 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 C2CD2LO14523 706 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 GABRDO14764 452 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 BIRC5O15392 142 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 LPXNO60711 386 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 DGKIO75912 1065 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 WFS1O76024 890 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 UNC5CO95185 931 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 APOEP02649 317 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 DHRS4L1P0CG22 281 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 ZNF865P0CJ78 1059 aaPredicted RBP8.6□□□□□ -1.03
SPG11-209ENST00000558253 SKIP12755 728 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 NQO1P15559 274 aaKnown RBP8.6□□□□□ -1.03
SPG11-209ENST00000558253 NPR3P17342 541 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 PTPN1P18031 435 aaKnown RBP8.6□□□□□ -1.03
SPG11-209ENST00000558253 RBL1P28749 1068 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 HTR7P34969 479 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 GLUD2P49448 558 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 RGS7P49802 495 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 MNAT1P51948 309 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 GJA9P57773 515 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 LILRA4P59901 499 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 YWHAGP61981 247 aaKnown RBP eCLIP8.6□□□□□ -1.03
SPG11-209ENST00000558253 ELF3P78545 371 aaPredicted RBP8.6□□□□□ -1.03
SPG11-209ENST00000558253 SATB1Q01826 763 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 ZNF33AQ06730 810 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 SCAPQ12770 1279 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 PTK7Q13308 1070 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 TAF5Q15542 800 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 CDO1Q16878 200 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 ATG16L1Q676U5 607 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 LVRNQ6Q4G3 990 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 ASRGL1Q7L266 308 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 BNIPLQ7Z465 357 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 SCML4Q8N228 414 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 C7orf31Q8N865 590 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 NPLOC4Q8TAT6 608 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 GSDMBQ8TAX9 411 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 SH3TC2Q8TF17 1288 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 KBTBD7Q8WVZ9 684 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 IRGQQ8WZA9 623 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms