RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 CCR3P51677 355 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 NOMO3P69849 1222 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 FMO1Q01740 532 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 KLHL30Q0D2K2 578 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 MTAPQ13126 283 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 NR1I3Q14994 352 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 FBXO43Q4G163 708 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 C2CD6Q53TS8 623 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 C2orf27AQ580R0 203 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 TMEM196Q5HYL7 178 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 NAIF1Q69YI7 327 aaPredicted RBP9.35□□□□□ -0.91
SPG11-207ENST00000558138 FSTL4Q6MZW2 842 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 MSANTD2Q6P1R3 559 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 OLFML1Q6UWY5 402 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 Q6ZS52 159 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 VPS36Q86VN1 386 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 ATP6V0D2Q8N8Y2 350 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 PRSS33Q8NF86 280 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 RPLP0P6Q8NHW5 317 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 SLC30A5Q8TAD4 765 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 DDX1Q92499 740 aaKnown RBP9.35□□□□□ -0.91
SPG11-207ENST00000558138 ACDQ96AP0 544 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 AGPAT1Q99943 283 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 IER2Q9BTL4 223 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.35□□□□□ -0.91
SPG11-207ENST00000558138 SELENOOQ9BVL4 669 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 XPO4Q9C0E2 1151 aaKnown RBP9.35□□□□□ -0.91
SPG11-207ENST00000558138 CHRDQ9H2X0 955 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 METTL5Q9NRN9 209 aaKnown RBP9.35□□□□□ -0.91
SPG11-207ENST00000558138 FAM86C1Q9NVL1 165 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 ASNSD1Q9NWL6 643 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.35□□□□□ -0.91
SPG11-207ENST00000558138 NOCTQ9UK39 431 aaKnown RBP9.35□□□□□ -0.91
SPG11-207ENST00000558138 MYO6Q9UM54 1294 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 TLR6Q9Y2C9 796 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.35□□□□□ -0.91
SPG11-207ENST00000558138 TRIOO75962 3097 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 ZDBF2Q9HCK1 2354 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 M0QYT0 321 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 HOXC11O43248 304 aaPredicted RBP9.34□□□□□ -0.91
SPG11-207ENST00000558138 ACSL4O60488 711 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 TULP3O75386 442 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 KAT7O95251 611 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 KLKB1P03952 638 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 CALB1P05937 261 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 SLC2A3P11169 496 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 CDH5P33151 784 aaPredicted RBP9.34□□□□□ -0.91
SPG11-207ENST00000558138 TIE1P35590 1138 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 OPRD1P41143 372 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 EIF2DP41214 584 aaKnown RBP9.34□□□□□ -0.91
SPG11-207ENST00000558138 GRIA2P42262 883 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 CXCL12P48061 93 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 RPL34P49207 117 aaKnown RBP9.34□□□□□ -0.91
SPG11-207ENST00000558138 DGKGP49619 791 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 ZNF445P59923 1031 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 TAF5Q15542 800 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 CLEC16AQ2KHT3 1053 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
SPG11-207ENST00000558138 MPPE1Q53F39 396 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 C10orf76Q5T2E6 689 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 SYPL2Q5VXT5 272 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 ZC3H14Q6PJT7 736 aaKnown RBP9.34□□□□□ -0.91
SPG11-207ENST00000558138 Q6ZNB5 142 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 C12orf40Q86WS4 652 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 CHSY1Q86X52 802 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 SYNPOQ8N3V7 929 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 SPEM1Q8N4L4 309 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 CLDN23Q96B33 292 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 IQCDQ96DY2 449 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 FAM122AQ96E09 287 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 PIWIL1Q96J94 861 aaKnown RBP9.34□□□□□ -0.91
SPG11-207ENST00000558138 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
SPG11-207ENST00000558138 ADAM22Q9P0K1 906 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 STIM2Q9P246 746 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 PAXBP1Q9Y5B6 917 aa9.34□□□□□ -0.91
SPG11-207ENST00000558138 F5H5T6 163 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 ZBTB24O43167 697 aaPredicted RBP9.33□□□□□ -0.92
SPG11-207ENST00000558138 IRAK2O43187 625 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 TBL1XO60907 577 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 LATS1O95835 1130 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 CHRNB2P17787 502 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 SDC4P31431 198 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 CCR1P32246 355 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 NOS2P35228 1153 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 MATKP42679 507 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 DEUP1Q05D60 604 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 RING1Q06587 406 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 NNTQ13423 1086 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 CCINQ13939 588 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 TRIM14Q14142 442 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 CDO1Q16878 200 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 ZC3H12AQ5D1E8 599 aaKnown RBP9.33□□□□□ -0.92
SPG11-207ENST00000558138 ADGRF1Q5T601 910 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 RAP1GAP2Q684P5 730 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 HEATR6Q6AI08 1181 aaKnown RBP9.33□□□□□ -0.92
SPG11-207ENST00000558138 SDE2Q6IQ49 451 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 PPP1R2P3Q6NXS1 205 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 DNAJC24Q6P3W2 148 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 RFWD3Q6PCD5 774 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 DCUN1D2Q6PH85 259 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms