RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 DQX1Q8TE96 717 aaKnown RBP12.77□□□□□ -0.37
RCCD1-209ENST00000557750 TRIM11Q96F44 468 aa12.77□□□□□ -0.37
RCCD1-209ENST00000557750 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.37
RCCD1-209ENST00000557750 ZFRQ96KR1 1074 aaKnown RBP12.77□□□□□ -0.37
RCCD1-209ENST00000557750 LRRC3BQ96PB8 259 aa12.77□□□□□ -0.37
RCCD1-209ENST00000557750 SLC2A13Q96QE2 648 aa12.77□□□□□ -0.37
RCCD1-209ENST00000557750 TRMT61BQ9BVS5 477 aaKnown RBP12.77□□□□□ -0.37
RCCD1-209ENST00000557750 KLF16Q9BXK1 252 aaPredicted RBP12.77□□□□□ -0.37
RCCD1-209ENST00000557750 ISCUQ9H1K1 167 aa12.77□□□□□ -0.37
RCCD1-209ENST00000557750 SPTLC3Q9NUV7 552 aa12.77□□□□□ -0.37
RCCD1-209ENST00000557750 THG1LQ9NWX6 298 aaKnown RBP12.77□□□□□ -0.37
RCCD1-209ENST00000557750 DLGAP2Q9P1A6 1054 aa12.77□□□□□ -0.37
RCCD1-209ENST00000557750 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
RCCD1-209ENST00000557750 DOCK8Q8NF50 2099 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 ATMINO43313 823 aaPredicted RBP12.76□□□□□ -0.37
RCCD1-209ENST00000557750 MSI1O43347 362 aaKnown RBP12.76□□□□□ -0.37
RCCD1-209ENST00000557750 GJB6O95452 261 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 KRT3P12035 628 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 GDI1P31150 447 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 GSCP56915 257 aaPredicted RBP12.76□□□□□ -0.37
RCCD1-209ENST00000557750 GSDMDP57764 484 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 COG7P83436 770 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 USP4Q13107 963 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 ASTE1Q2TB18 679 aaPredicted RBP12.76□□□□□ -0.37
RCCD1-209ENST00000557750 MSANTD2Q6P1R3 559 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 TAC4Q86UU9 113 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 EMC1Q8N766 993 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 RIN3Q8TB24 985 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 ZNF653Q96CK0 615 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 PDLIM2Q96JY6 352 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 FAM204AQ9H8W3 233 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 ARHGEF3Q9NR81 526 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.76□□□□□ -0.377e-6■■■■□ 21.6
RCCD1-209ENST00000557750 SIT1Q9Y3P8 196 aa12.76□□□□□ -0.37
RCCD1-209ENST00000557750 GPR179Q6PRD1 2367 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 SYNJ2BP-COX16A0A087WUM0 186 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 ZNF263O14978 683 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 SP9P0CG40 484 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 MYBL1P10243 752 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 TCF3P15923 654 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 NOS2P35228 1153 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 FLT3P36888 993 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 MATKP42679 507 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 FCHO2Q0JRZ9 810 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 DCUN1D2Q6PH85 259 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 TMTC1Q8IUR5 882 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 ZFYVE19Q96K21 471 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 SERPINB11Q96P15 392 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 BRD9Q9H8M2 597 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 PARVAQ9NVD7 372 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 COX16Q9P0S2 106 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 MYO1AQ9UBC5 1043 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 CNOT8Q9UFF9 292 aaKnown RBP12.75□□□□□ -0.37
RCCD1-209ENST00000557750 TMEM59LQ9UK28 342 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 LSM7Q9UK45 103 aaKnown RBP12.75□□□□□ -0.37
RCCD1-209ENST00000557750 STAP1Q9ULZ2 295 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 MYO16Q9Y6X6 1858 aa12.75□□□□□ -0.37
RCCD1-209ENST00000557750 ANKRD62A6NC57 917 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 TRUB2O95900 331 aaKnown RBP12.74□□□□□ -0.37
RCCD1-209ENST00000557750 GLULP15104 373 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 SULT1E1P49888 294 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 KPNA1P52294 538 aaPredicted RBP12.74□□□□□ -0.37
RCCD1-209ENST00000557750 GPC5P78333 572 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 PITX1P78337 314 aaPredicted RBP12.74□□□□□ -0.37
RCCD1-209ENST00000557750 NME3Q13232 169 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 DGLUCYQ7Z3D6 616 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 C1orf210Q8IVY1 113 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 JOSD2Q8TAC2 188 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 WBP2Q969T9 261 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 CFAP57Q96MR6 1250 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 MCEEQ96PE7 176 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 BAG1Q99933 345 aaPredicted RBP12.74□□□□□ -0.37
RCCD1-209ENST00000557750 FOXQ1Q9C009 403 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 THAP2Q9H0W7 228 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 SLC2A4RGQ9NR83 387 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 DDIT4Q9NX09 232 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 DUS2Q9NX74 493 aaKnown RBP12.74□□□□□ -0.37
RCCD1-209ENST00000557750 HBS1LQ9Y450 684 aaKnown RBP12.74□□□□□ -0.37
RCCD1-209ENST00000557750 WNT6Q9Y6F9 365 aa12.74□□□□□ -0.37
RCCD1-209ENST00000557750 E2F8A0AVK6 867 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 SOWAHDA6NJG2 315 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 SIGLEC16A6NMB1 481 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 M0QYT0 321 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 STC2O76061 302 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 PDGFRAP16234 1089 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 SDC4P31431 198 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 GBP1P32455 592 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 RFC1P35251 1148 aaPredicted RBP12.73□□□□□ -0.37
RCCD1-209ENST00000557750 CYLC1P35663 651 aaPredicted RBP12.73□□□□□ -0.37
RCCD1-209ENST00000557750 IFNAR2P48551 515 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 HARS2P49590 506 aaKnown RBP12.73□□□□□ -0.37
RCCD1-209ENST00000557750 GALCP54803 685 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 TBX4P57082 545 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 MAMLD1Q13495 774 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 TRIP4Q15650 581 aaPredicted RBP12.73□□□□□ -0.37
RCCD1-209ENST00000557750 TRIM68Q6AZZ1 485 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 ARCQ7LC44 396 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 CCDC170Q8IYT3 715 aa12.73□□□□□ -0.37
RCCD1-209ENST00000557750 DCLK2Q8N568 766 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms